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Encog 2.0 supports recurrent nets. Here is an example of what the syntax looks like.
static BasicNetwork createElmanNetwork()
{
// construct an Elman type network
Layer hidden;
Layer context = new ContextLayer(2);
BasicNetwork network = new BasicNetwork();
network.addLayer(new BasicLayer(1));
network.addLayer(hidden = new BasicLayer(2));
hidden.addNext(context,SynapseType.OneToOne);
context.addNext(hidden);
network.addLayer(new BasicLayer(1));
network.getStructure().finalizeStructure();
network.reset();
return network;
}
It is still a few more months before we do an official Encog 2.0 release, though. However, this code is checked into SVN.