A B C D E F G H I J K L M N O P Q R S T U V W X Y

A

AbstractPNN - Class in org.encog.neural.pnn
Abstract class to build PNN networks upon.
AbstractPNN(PNNKernelType, PNNOutputMode, int, int) - Constructor for class org.encog.neural.pnn.AbstractPNN
Constructor.
actionPerformed(ActionEvent) - Method in class org.encog.util.simple.TrainingDialog
Called when the user clicks the stop button.
ACTIVATION_FUNCTION - Static variable in class org.encog.persist.PersistConst
Activation function.
ACTIVATION_RESPONSE - Static variable in class org.encog.neural.neat.NEATNeuron
 
ACTIVATION_TYPE - Static variable in class org.encog.persist.PersistConst
An activation function.
ActivationBiPolar - Class in org.encog.engine.network.activation
BiPolar activation function.
ActivationBiPolar() - Constructor for class org.encog.engine.network.activation.ActivationBiPolar
Construct the bipolar activation function.
ActivationCompetitive - Class in org.encog.engine.network.activation
An activation function that only allows a specified number, usually one, of the out-bound connection to win.
ActivationCompetitive() - Constructor for class org.encog.engine.network.activation.ActivationCompetitive
Create a competitive activation function with one winner allowed.
ActivationCompetitive(int) - Constructor for class org.encog.engine.network.activation.ActivationCompetitive
Create a competitive activation function with the specified maximum number of winners.
activationFunction(double[], int, int) - Method in class org.encog.engine.network.activation.ActivationBiPolar
Implements the activation function.
activationFunction(double[], int, int) - Method in class org.encog.engine.network.activation.ActivationCompetitive
Implements the activation function.
ActivationFunction - Interface in org.encog.engine.network.activation
This interface allows various activation functions to be used with the neural network.
activationFunction(double[], int, int) - Method in interface org.encog.engine.network.activation.ActivationFunction
Implements the activation function.
activationFunction(double[], int, int) - Method in class org.encog.engine.network.activation.ActivationGaussian
Implements the activation function.
activationFunction(double[], int, int) - Method in class org.encog.engine.network.activation.ActivationLinear
Implements the activation function.
activationFunction(double[], int, int) - Method in class org.encog.engine.network.activation.ActivationLOG
Implements the activation function.
activationFunction(double[], int, int) - Method in class org.encog.engine.network.activation.ActivationRamp
Implements the activation function.
activationFunction(double[], int, int) - Method in class org.encog.engine.network.activation.ActivationSigmoid
Implements the activation function.
activationFunction(double[], int, int) - Method in class org.encog.engine.network.activation.ActivationSIN
Implements the activation function.
activationFunction(double[], int, int) - Method in class org.encog.engine.network.activation.ActivationSoftMax
Implements the activation function.
activationFunction(double[], int, int) - Method in class org.encog.engine.network.activation.ActivationStep
Implements the activation function.
activationFunction(double[], int, int) - Method in class org.encog.engine.network.activation.ActivationTANH
Implements the activation function.
ActivationGaussian - Class in org.encog.engine.network.activation
An activation function based on the gaussian function.
ActivationGaussian(double, double, double) - Constructor for class org.encog.engine.network.activation.ActivationGaussian
Create a gaussian activation function.
ActivationLinear - Class in org.encog.engine.network.activation
The Linear layer is really not an activation function at all.
ActivationLinear() - Constructor for class org.encog.engine.network.activation.ActivationLinear
Construct a linear activation function, with a slope of 1.
ActivationLOG - Class in org.encog.engine.network.activation
An activation function based on the logarithm function.
ActivationLOG() - Constructor for class org.encog.engine.network.activation.ActivationLOG
Construct the activation function.
ActivationRamp - Class in org.encog.engine.network.activation
A ramp activation function.
ActivationRamp() - Constructor for class org.encog.engine.network.activation.ActivationRamp
Default constructor.
ActivationRamp(double, double, double, double) - Constructor for class org.encog.engine.network.activation.ActivationRamp
Construct a ramp activation function.
ActivationSigmoid - Class in org.encog.engine.network.activation
The sigmoid activation function takes on a sigmoidal shape.
ActivationSigmoid() - Constructor for class org.encog.engine.network.activation.ActivationSigmoid
Construct a basic sigmoid function, with a slope of 1.
ActivationSIN - Class in org.encog.engine.network.activation
An activation function based on the sin function.
ActivationSIN() - Constructor for class org.encog.engine.network.activation.ActivationSIN
Construct the sin activation function.
ActivationSoftMax - Class in org.encog.engine.network.activation
The softmax activation function.
ActivationSoftMax() - Constructor for class org.encog.engine.network.activation.ActivationSoftMax
Construct the soft-max activation function.
ActivationStep - Class in org.encog.engine.network.activation
The step activation function is a very simple activation function.
ActivationStep() - Constructor for class org.encog.engine.network.activation.ActivationStep
Create a basic step activation with low=0, center=0, high=1.
ActivationStep(double, double, double) - Constructor for class org.encog.engine.network.activation.ActivationStep
Construct a step activation function.
ActivationTANH - Class in org.encog.engine.network.activation
The hyperbolic tangent activation function takes the curved shape of the hyperbolic tangent.
ActivationTANH() - Constructor for class org.encog.engine.network.activation.ActivationTANH
Construct a basic HTAN activation function, with a slope of 1.
ADALINEPattern - Class in org.encog.neural.pattern
Construct an ADALINE neural network.
ADALINEPattern() - Constructor for class org.encog.neural.pattern.ADALINEPattern
 
add(double) - Method in class org.encog.app.quant.util.BarBuffer
Add a bar.
add(double[]) - Method in class org.encog.app.quant.util.BarBuffer
Add a bar.
add(int, int, double) - Method in class org.encog.mathutil.matrices.Matrix
Add a value to one cell in the matrix.
add(Matrix) - Method in class org.encog.mathutil.matrices.Matrix
Add the specified matrix to this matrix.
add(Matrix, Matrix) - Static method in class org.encog.mathutil.matrices.MatrixMath
Add two matrixes.
add(int, double) - Method in class org.encog.ml.data.basic.BasicMLData
Add a value to the specified index.
add(MLData) - Method in class org.encog.ml.data.basic.BasicMLDataSet
Add a object to the dataset.
add(MLData, MLData) - Method in class org.encog.ml.data.basic.BasicMLDataSet
Add a set of input and ideal data to the dataset.
add(MLDataPair) - Method in class org.encog.ml.data.basic.BasicMLDataSet
Add a an object to the dataset.
add(MLData) - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Add only input data, for an unsupervised dataset.
add(MLData, MLData) - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Add both the input and ideal data.
add(MLDataPair) - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Add a data pair of both input and ideal data.
add(MLData) - Method in class org.encog.ml.data.folded.FoldedDataSet
Not supported.
add(MLData, MLData) - Method in class org.encog.ml.data.folded.FoldedDataSet
Not supported.
add(MLDataPair) - Method in class org.encog.ml.data.folded.FoldedDataSet
Not supported.
add(int, double) - Method in interface org.encog.ml.data.MLData
Add a value to the specified index.
add(MLData) - Method in interface org.encog.ml.data.MLDataSet
Add a object to the dataset.
add(MLData, MLData) - Method in interface org.encog.ml.data.MLDataSet
Add a set of input and ideal data to the dataset.
add(MLDataPair) - Method in interface org.encog.ml.data.MLDataSet
Add a an object to the dataset.
add(int, double) - Method in class org.encog.ml.data.specific.BiPolarNeuralData
This will throw an error, as "add" is not supported for bipolar.
add(Gene) - Method in class org.encog.ml.genetic.genome.Chromosome
Add a gene.
add(Innovation) - Method in class org.encog.ml.genetic.innovation.BasicInnovationList
Add an innovation.
add(Innovation) - Method in interface org.encog.ml.genetic.innovation.InnovationList
Add an innovation.
add(Genome) - Method in class org.encog.ml.genetic.population.BasicPopulation
Add a genome to the population.
add(Genome) - Method in interface org.encog.ml.genetic.population.Population
Add a genome to the population.
add(MLData) - Method in class org.encog.ml.kmeans.KMeansCluster
Add to the cluster.
add(MLData) - Method in interface org.encog.ml.MLCluster
Add data to this cluster.
add(EncogPersistor) - Method in class org.encog.persist.PersistorRegistry
Add a persistor.
add(String, File) - Method in class org.encog.util.http.FormUtility
Add a file to a multipart form.
add(String, String) - Method in class org.encog.util.http.FormUtility
Add a regular text field to either a regular or multipart form.
ADD_NOT_SUPPORTED - Static variable in class org.encog.ml.data.folded.FoldedDataSet
Error message: adds are not supported.
addAll(List<? extends Genome>) - Method in class org.encog.ml.genetic.population.BasicPopulation
Add all of the specified members to this population.
addAll(List<? extends Genome>) - Method in interface org.encog.ml.genetic.population.Population
Add all of the specified members to this population.
addAnalystListener(AnalystListener) - Method in class org.encog.app.analyst.EncogAnalyst
Add a listener.
addAttribute(String, String) - Method in class org.encog.parse.tags.write.WriteTags
Add an attribute to be written with the next tag.
addCDATA(String) - Method in class org.encog.parse.tags.write.WriteTags
Add CDATA to the output stream.
addColumn(BaseCachedColumn) - Method in class org.encog.app.analyst.csv.basic.BasicCachedFile
Add a new column.
addColumn(int, boolean) - Method in class org.encog.ml.data.buffer.EncogEGBFile
Add a column.
addColumn(boolean) - Method in class org.encog.persist.EncogWriteHelper
Add a boolean value as a column.
addColumn(double) - Method in class org.encog.persist.EncogWriteHelper
Add a column as a double.
addColumn(int) - Method in class org.encog.persist.EncogWriteHelper
Add a column as an integer.
addColumn(String) - Method in class org.encog.persist.EncogWriteHelper
Add a column as a string.
addColumns(List<String>) - Method in class org.encog.persist.EncogWriteHelper
Add a list of string columns.
addCommand(Cmd) - Method in class org.encog.app.analyst.EncogAnalyst
Add a command.
addContent(DocumentRange) - Method in class org.encog.bot.browse.WebPage
Add to the content collection.
addDataUnit(DataUnit) - Method in class org.encog.bot.browse.WebPage
Add a data unit to the collection.
addElement(DocumentRange) - Method in class org.encog.bot.browse.range.DocumentRange
Add an element.
addFilenameBase(File, String) - Static method in class org.encog.util.file.FileUtil
 
addHiddenLayer(int) - Method in class org.encog.neural.pattern.ADALINEPattern
Not used, the ADALINE has no hidden layers, this will throw an error.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.ART1Pattern
This will fail, hidden layers are not supported for this type of network.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.BAMPattern
Unused, a BAM has no hidden layers.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.BoltzmannPattern
Not supported, will throw an exception, Boltzmann networks have no hidden layers.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.CPNPattern
Not used, will throw an error.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.ElmanPattern
Add a hidden layer with the specified number of neurons.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.FeedForwardPattern
Add a hidden layer, with the specified number of neurons.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.HopfieldPattern
Add a hidden layer.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.JordanPattern
Add a hidden layer, there should be only one.
addHiddenLayer(int) - Method in interface org.encog.neural.pattern.NeuralNetworkPattern
Add the specified hidden layer.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.PNNPattern
Add a hidden layer.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.RadialBasisPattern
Add the hidden layer, this should be called once, as a RBF has a single hidden layer.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.SOMPattern
Add a hidden layer.
addHiddenLayer(int) - Method in class org.encog.neural.pattern.SVMPattern
Unused, a BAM has no hidden layers.
addHiddenLayer(int, int) - Method in class org.encog.neural.prune.PruneIncremental
Add a hidden layer's min and max.
addLayer(Layer) - Method in class org.encog.neural.networks.BasicNetwork
Add a layer to the neural network.
addLine(String) - Method in class org.encog.persist.EncogWriteHelper
Add a line.
addNeuronID(long, List<Long>) - Method in class org.encog.neural.neat.training.NEATTraining
Add a neuron.
addPattern(MLData, MLData) - Method in class org.encog.neural.bam.BAM
Add a pattern to the neural network.
addPattern(MLData) - Method in class org.encog.neural.thermal.HopfieldNetwork
Train the neural network for the specified pattern.
addPerformer(ConcurrentTrainingPerformer) - Method in class org.encog.neural.networks.training.concurrent.ConcurrentTrainingManager
Add a performer.
addProperties(Map<String, String>) - Method in class org.encog.persist.EncogWriteHelper
Add the specified properties.
addProperty(String, double) - Method in class org.encog.parse.tags.write.WriteTags
Add a property as a double.
addProperty(String, int) - Method in class org.encog.parse.tags.write.WriteTags
Add a property as an integer.
addProperty(String, String) - Method in class org.encog.parse.tags.write.WriteTags
Add a property as a string.
addProperty(String, double[], int) - Method in class org.encog.parse.tags.write.WriteTags
Write an array as a property.
addProperty(String, int[], int) - Method in class org.encog.parse.tags.write.WriteTags
Write an array as a property.
addRawHeadings(StringBuilder, String, CSVFormat) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Add headings for a raw file.
Address - Class in org.encog.bot.browse
A URL address.
Address(URL) - Constructor for class org.encog.bot.browse.Address
Construct the address from a URL.
Address(URL, String) - Constructor for class org.encog.bot.browse.Address
Construct a URL using a perhaps relative URL and a base URL.
addRow(int) - Method in class org.encog.ml.data.buffer.EncogEGBFile
Add a row.
addSection(String) - Method in class org.encog.persist.EncogWriteHelper
Add a new section.
addSpeciesMember(Species, Genome) - Method in class org.encog.ml.genetic.GeneticAlgorithm
Add a genome.
addStrategy(Strategy) - Method in class org.encog.ml.train.BasicTraining
Training strategies can be added to improve the training results.
addStrategy(Strategy) - Method in interface org.encog.ml.train.MLTrain
Training strategies can be added to improve the training results.
addStrategy(Strategy) - Method in class org.encog.neural.neat.training.NEATTraining
Not supported, will throw an error.
addSubSection(String) - Method in class org.encog.persist.EncogWriteHelper
Add a new subsection.
addTask(AnalystTask) - Method in class org.encog.app.analyst.script.AnalystScript
Add a task.
addText(String) - Method in class org.encog.parse.tags.write.WriteTags
Add text.
addTrainingJob(TrainingJob) - Method in class org.encog.neural.networks.training.concurrent.ConcurrentTrainingManager
Add a training job.
addWeight(int, int, int, double) - Method in class org.encog.neural.networks.BasicNetwork
Add to a weight.
addWeight(int, int, double) - Method in class org.encog.neural.thermal.ThermalNetwork
Add to the specified weight.
adjustCompatibilityThreshold() - Method in class org.encog.neural.neat.training.NEATTraining
Adjust the species compatibility threshold.
adjustSpeciesScore() - Method in class org.encog.neural.neat.training.NEATTraining
Adjust each species score.
adjustWeights() - Method in class org.encog.neural.art.ART1
Adjust the weights for the pattern just presented.
advance() - Method in class org.encog.util.SimpleParser
 
advance(int) - Method in class org.encog.util.SimpleParser
 
allConsoleLogging() - Static method in class org.encog.util.logging.Logging
Log everything to the console.
allocate(int) - Method in class org.encog.app.analyst.csv.basic.BaseCachedColumn
Allocate enough space for this column.
alreadyHaveThisNeuronID(long) - Method in class org.encog.neural.neat.training.NEATGenome
Do we already have this neuron id?
AnalystClassItem - Class in org.encog.app.analyst.script
Holds a class item for the script.
AnalystClassItem(String, String, int) - Constructor for class org.encog.app.analyst.script.AnalystClassItem
Construct a class item.
AnalystClusterCSV - Class in org.encog.app.analyst.csv
Used by the analyst to cluster a CSV file.
AnalystClusterCSV() - Constructor for class org.encog.app.analyst.csv.AnalystClusterCSV
 
AnalystError - Exception in org.encog.app.analyst
An error has occured with the Encog Analyst.
AnalystError(String) - Constructor for exception org.encog.app.analyst.AnalystError
Construct a message exception.
AnalystError(Throwable) - Constructor for exception org.encog.app.analyst.AnalystError
Construct an exception that holds another exception.
AnalystEvaluateCSV - Class in org.encog.app.analyst.csv
Used by the analyst to evaluate a CSV file.
AnalystEvaluateCSV() - Constructor for class org.encog.app.analyst.csv.AnalystEvaluateCSV
 
AnalystEvaluateRawCSV - Class in org.encog.app.analyst.csv
Used by the analyst to evaluate a CSV file.
AnalystEvaluateRawCSV() - Constructor for class org.encog.app.analyst.csv.AnalystEvaluateRawCSV
 
AnalystField - Class in org.encog.app.analyst.script.normalize
Holds a field to be analyzed.
AnalystField() - Constructor for class org.encog.app.analyst.script.normalize.AnalystField
Construct the object with a range of 1 and -1.
AnalystField(AnalystField) - Constructor for class org.encog.app.analyst.script.normalize.AnalystField
Construct an analyst field.
AnalystField(double, double) - Constructor for class org.encog.app.analyst.script.normalize.AnalystField
Construct the object.
AnalystField(NormalizationAction, String) - Constructor for class org.encog.app.analyst.script.normalize.AnalystField
Construct an object.
AnalystField(NormalizationAction, String, double, double, double, double) - Constructor for class org.encog.app.analyst.script.normalize.AnalystField
Construct the field, with no defaults.
AnalystField(String, NormalizationAction, double, double) - Constructor for class org.encog.app.analyst.script.normalize.AnalystField
Construct an analyst field to use.
AnalystFileFormat - Enum in org.encog.app.analyst
CSV file formats used by the Encog Analyst.
analystFileFormat2String(AnalystFileFormat) - Static method in class org.encog.app.analyst.util.ConvertStringConst
Convert a file format to a string.
AnalystGoal - Enum in org.encog.app.analyst
What is the goal of the Encog Analyst?
AnalystListener - Interface in org.encog.app.analyst
Reports the progress of the Encog Analyst.
AnalystNormalize - Class in org.encog.app.analyst.script.normalize
This class holds information about the fields that the Encog Analyst will normalize.
AnalystNormalize() - Constructor for class org.encog.app.analyst.script.normalize.AnalystNormalize
 
AnalystNormalizeCSV - Class in org.encog.app.analyst.csv.normalize
Normalize, or denormalize, a CSV file.
AnalystNormalizeCSV() - Constructor for class org.encog.app.analyst.csv.normalize.AnalystNormalizeCSV
 
AnalystReport - Class in org.encog.app.analyst.report
Produce a simple report on the makeup of the script and data to be analyued.
AnalystReport(EncogAnalyst) - Constructor for class org.encog.app.analyst.report.AnalystReport
Construct the report.
AnalystReportBridge - Class in org.encog.app.analyst.util
Used to bridge the AnalystListerner to an StatusReportable object.
AnalystReportBridge(EncogAnalyst) - Constructor for class org.encog.app.analyst.util.AnalystReportBridge
Construct the bridge object.
AnalystScript - Class in org.encog.app.analyst.script
Holds a script for the Encog Analyst.
AnalystScript() - Constructor for class org.encog.app.analyst.script.AnalystScript
Construct an analyst script.
AnalystSegregate - Class in org.encog.app.analyst.script.segregate
Holds all of the segregation targets for a script.
AnalystSegregate() - Constructor for class org.encog.app.analyst.script.segregate.AnalystSegregate
 
AnalystSegregateTarget - Class in org.encog.app.analyst.script.segregate
This class specifies a target for the segregation process.
AnalystSegregateTarget(String, int) - Constructor for class org.encog.app.analyst.script.segregate.AnalystSegregateTarget
Construct the segregation target.
AnalystTask - Class in org.encog.app.analyst.script.task
Holds a task in the script.
AnalystTask(String) - Constructor for class org.encog.app.analyst.script.task.AnalystTask
Construct an analyst task.
AnalystWizard - Class in org.encog.app.analyst.wizard
The Encog Analyst Wizard can be used to create Encog Analyst script files from a CSV file.
AnalystWizard(EncogAnalyst) - Constructor for class org.encog.app.analyst.wizard.AnalystWizard
Construct the analyst wizard.
analyze(EncogAnalyst, File, boolean, CSVFormat) - Method in class org.encog.app.analyst.csv.AnalystClusterCSV
Analyze the data.
analyze(EncogAnalyst, File, boolean, CSVFormat) - Method in class org.encog.app.analyst.csv.AnalystEvaluateCSV
Analyze the data.
analyze(EncogAnalyst, File, boolean, CSVFormat) - Method in class org.encog.app.analyst.csv.AnalystEvaluateRawCSV
Analyze the data.
analyze(File, boolean, CSVFormat) - Method in class org.encog.app.analyst.csv.balance.BalanceCSV
Analyze the data.
analyze(File, boolean, CSVFormat) - Method in class org.encog.app.analyst.csv.basic.BasicCachedFile
Analyze the input file.
analyze(File, boolean, CSVFormat) - Method in class org.encog.app.analyst.csv.filter.FilterCSV
Analyze the file.
analyze(File, boolean, CSVFormat, EncogAnalyst) - Method in class org.encog.app.analyst.csv.normalize.AnalystNormalizeCSV
Analyze the file.
analyze(File, boolean, CSVFormat) - Method in class org.encog.app.analyst.csv.segregate.SegregateCSV
Analyze the input file.
analyze(File, boolean, CSVFormat) - Method in class org.encog.app.analyst.csv.shuffle.ShuffleCSV
Analyze the neural network.
analyze(File, boolean, AnalystFileFormat) - Method in class org.encog.app.analyst.EncogAnalyst
Analyze the specified file.
analyze(double) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Analyze the specified value.
analyze(double) - Method in class org.encog.util.arrayutil.NormalizedField
Analyze the specified value.
analyze(double[]) - Method in class org.encog.util.arrayutil.TemporalWindowArray
Analyze the 1D array.
analyze(double[][]) - Method in class org.encog.util.arrayutil.TemporalWindowArray
Analyze the 2D array.
analyze1(String) - Method in class org.encog.app.analyst.analyze.AnalyzedField
Perform a pass one analysis of this field.
analyze2(String) - Method in class org.encog.app.analyst.analyze.AnalyzedField
Perform a pass two analysis of this field.
AnalyzedField - Class in org.encog.app.analyst.analyze
This class represents a field that the Encog Analyst is in the process of analyzing.
AnalyzedField(AnalystScript, String) - Constructor for class org.encog.app.analyst.analyze.AnalyzedField
Construct an analyzed field.
AnalyzeNetwork - Class in org.encog.neural.networks.structure
Allows the weights and bias values of the neural network to be analyzed.
AnalyzeNetwork(BasicNetwork) - Constructor for class org.encog.neural.networks.structure.AnalyzeNetwork
Construct a network analyze class.
ANNEAL_CYCLES - Static variable in class org.encog.neural.thermal.BoltzmannMachine
The property for anneal cycles.
AnnealFactory - Class in org.encog.ml.factory.train
A factory to create simulated annealing trainers.
AnnealFactory() - Constructor for class org.encog.ml.factory.train.AnnealFactory
 
appendSeparator(StringBuilder, CSVFormat) - Static method in class org.encog.app.analyst.csv.basic.BasicFile
Append a separator.
applyBonus(double, double) - Method in class org.encog.ml.genetic.genome.GenomeComparator
Apply a bonus, this is a simple percent that is applied in the direction specified by the "should minimize" property of the score function.
applyPenalty(double, double) - Method in class org.encog.ml.genetic.genome.GenomeComparator
Apply a penalty, this is a simple percent that is applied in the direction specified by the "should minimize" property of the score function.
ArchitectureLayer - Class in org.encog.ml.factory.parse
Holds the parse results for one layer.
ArchitectureLayer() - Constructor for class org.encog.ml.factory.parse.ArchitectureLayer
 
ArchitectureParse - Class in org.encog.ml.factory.parse
This class is used to parse a Encog architecture string.
arrayCopy(double[]) - Static method in class org.encog.util.EngineArray
Copy a double array.
arrayCopy(double[], double[]) - Static method in class org.encog.util.EngineArray
Completely copy one array into another.
arrayCopy(double[], float[]) - Static method in class org.encog.util.EngineArray
Copy an array of floats to an array of doubles.
arrayCopy(double[], int, double[], int, int) - Static method in class org.encog.util.EngineArray
Copy an array of doubles.
arrayCopy(double[][]) - Static method in class org.encog.util.EngineArray
Copy a 2D double array.
arrayCopy(float[], double[]) - Static method in class org.encog.util.EngineArray
Copy an array of floats to an array of doubles.
arrayCopy(int[]) - Static method in class org.encog.util.EngineArray
Copy an int array.
arrayCopy(int[], int[]) - Static method in class org.encog.util.EngineArray
Completely copy one array into another.
ArrayDataCODEC - Class in org.encog.ml.data.buffer.codec
A CODEC used for arrays.
ArrayDataCODEC(double[][], double[][]) - Constructor for class org.encog.ml.data.buffer.codec.ArrayDataCODEC
Construct an array CODEC.
ArrayDataCODEC() - Constructor for class org.encog.ml.data.buffer.codec.ArrayDataCODEC
Default constructor.
arrayToNetwork(double[], MLMethod) - Static method in class org.encog.neural.networks.structure.NetworkCODEC
Use an array to populate the memory of the neural network.
ART - Class in org.encog.neural.art
Adaptive Resonance Theory (ART) is a form of neural network developed by Stephen Grossberg and Gail Carpenter.
ART() - Constructor for class org.encog.neural.art.ART
 
ART1 - Class in org.encog.neural.art
Implements an ART1 neural network.
ART1() - Constructor for class org.encog.neural.art.ART1
Default constructor, used mainly for persistence.
ART1(int, int) - Constructor for class org.encog.neural.art.ART1
Construct the ART1 network.
ART1Pattern - Class in org.encog.neural.pattern
Pattern to create an ART-1 neural network.
ART1Pattern() - Constructor for class org.encog.neural.pattern.ART1Pattern
 
assignGeneID() - Method in class org.encog.ml.genetic.population.BasicPopulation
assignGeneID() - Method in interface org.encog.ml.genetic.population.Population
 
assignGenomeID() - Method in class org.encog.ml.genetic.population.BasicPopulation
assignGenomeID() - Method in interface org.encog.ml.genetic.population.Population
 
assignInnovationID() - Method in class org.encog.ml.genetic.population.BasicPopulation
assignInnovationID() - Method in interface org.encog.ml.genetic.population.Population
 
assignSpeciesID() - Method in class org.encog.ml.genetic.population.BasicPopulation
assignSpeciesID() - Method in interface org.encog.ml.genetic.population.Population
 
autoDecay() - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
Should be called each iteration if autodecay is desired.
average(int) - Method in class org.encog.app.quant.util.BarBuffer
Average all of the bars.
averageGain(int) - Method in class org.encog.app.quant.util.BarBuffer
Get the average gain.
averageLoss(int) - Method in class org.encog.app.quant.util.BarBuffer
Get the average loss.

B

Backpropagation - Class in org.encog.neural.networks.training.propagation.back
This class implements a backpropagation training algorithm for feed forward neural networks.
Backpropagation(ContainsFlat, MLDataSet) - Constructor for class org.encog.neural.networks.training.propagation.back.Backpropagation
Create a class to train using backpropagation.
Backpropagation(ContainsFlat, MLDataSet, double, double) - Constructor for class org.encog.neural.networks.training.propagation.back.Backpropagation
 
BackPropFactory - Class in org.encog.ml.factory.train
A factory for backpropagation training.
BackPropFactory() - Constructor for class org.encog.ml.factory.train.BackPropFactory
 
BALANCE_CONFIG_BALANCE_FIELD - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "BALANCE:CONFIG_balanceField".
BALANCE_CONFIG_COUNT_PER - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "BALANCE:CONFIG_countPer".
BALANCE_CONFIG_SOURCE_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "BALANCE:CONFIG_sourceFile".
BALANCE_CONFIG_TARGET_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "BALANCE:CONFIG_targetFile".
BalanceCSV - Class in org.encog.app.analyst.csv.balance
Balance a CSV file.
BalanceCSV() - Constructor for class org.encog.app.analyst.csv.balance.BalanceCSV
 
BAM - Class in org.encog.neural.bam
Bidirectional associative memory (BAM) is a type of neural network developed by Bart Kosko in 1988.
BAM() - Constructor for class org.encog.neural.bam.BAM
Default constructor, used mainly for persistence.
BAM(int, int) - Constructor for class org.encog.neural.bam.BAM
Construct the BAM network.
BAMPattern - Class in org.encog.neural.pattern
Construct a Bidirectional Access Memory (BAM) neural network.
BAMPattern() - Constructor for class org.encog.neural.pattern.BAMPattern
 
BarBuffer - Class in org.encog.app.quant.util
A buffer of bar segments.
BarBuffer(int) - Constructor for class org.encog.app.quant.util.BarBuffer
Construct the object.
BaseCachedColumn - Class in org.encog.app.analyst.csv.basic
A basic cached column.
BaseCachedColumn(String, boolean, boolean) - Constructor for class org.encog.app.analyst.csv.basic.BaseCachedColumn
Construct the cached column.
BasicCachedFile - Class in org.encog.app.analyst.csv.basic
Forms the foundation of all of the cached files in Encog Quant.
BasicCachedFile() - Constructor for class org.encog.app.analyst.csv.basic.BasicCachedFile
 
BasicFile - Class in org.encog.app.analyst.csv.basic
Many of the Encog quant CSV processors are based upon this class.
BasicFile() - Constructor for class org.encog.app.analyst.csv.basic.BasicFile
Construct the object, and set the defaults.
BasicGene - Class in org.encog.ml.genetic.genes
Implements the basic functionality for a gene.
BasicGene() - Constructor for class org.encog.ml.genetic.genes.BasicGene
 
BasicGenerateID - Class in org.encog.util.identity
Used to generate a unique id.
BasicGenerateID() - Constructor for class org.encog.util.identity.BasicGenerateID
Construct the ID generator to start at 1.
BasicGeneticAlgorithm - Class in org.encog.ml.genetic
Provides a basic implementation of a genetic algorithm.
BasicGeneticAlgorithm() - Constructor for class org.encog.ml.genetic.BasicGeneticAlgorithm
 
BasicGenome - Class in org.encog.ml.genetic.genome
A basic abstract genome.
BasicGenome() - Constructor for class org.encog.ml.genetic.genome.BasicGenome
 
BasicInnovation - Class in org.encog.ml.genetic.innovation
Provides basic functionality for an innovation.
BasicInnovation() - Constructor for class org.encog.ml.genetic.innovation.BasicInnovation
 
BasicInnovationList - Class in org.encog.ml.genetic.innovation
Provides basic functionality for a list of innovations.
BasicInnovationList() - Constructor for class org.encog.ml.genetic.innovation.BasicInnovationList
 
BasicLayer - Class in org.encog.neural.networks.layers
Basic functionality that most of the neural layers require.
BasicLayer(ActivationFunction, boolean, int) - Constructor for class org.encog.neural.networks.layers.BasicLayer
Construct this layer with a non-default activation function, also determine if a bias is desired or not.
BasicLayer(int) - Constructor for class org.encog.neural.networks.layers.BasicLayer
Construct this layer with a sigmoid activation function.
BasicML - Class in org.encog.ml
A class that provides basic property functionality for the MLProperties interface.
BasicML() - Constructor for class org.encog.ml.BasicML
 
BasicMLData - Class in org.encog.ml.data.basic
Basic implementation of the MLData interface that stores the data in an array.
BasicMLData(double[]) - Constructor for class org.encog.ml.data.basic.BasicMLData
Construct this object with the specified data.
BasicMLData(int) - Constructor for class org.encog.ml.data.basic.BasicMLData
Construct this object with blank data and a specified size.
BasicMLData(MLData) - Constructor for class org.encog.ml.data.basic.BasicMLData
Construct a new BasicMLData object from an existing one.
BasicMLDataPair - Class in org.encog.ml.data.basic
A basic implementation of the MLDataPair interface.
BasicMLDataPair(MLData) - Constructor for class org.encog.ml.data.basic.BasicMLDataPair
Construct the object with only input.
BasicMLDataPair(MLData, MLData) - Constructor for class org.encog.ml.data.basic.BasicMLDataPair
Construct a BasicMLDataPair class with the specified input and ideal values.
BasicMLDataSet - Class in org.encog.ml.data.basic
Stores data in an ArrayList.
BasicMLDataSet() - Constructor for class org.encog.ml.data.basic.BasicMLDataSet
Default constructor.
BasicMLDataSet(double[][], double[][]) - Constructor for class org.encog.ml.data.basic.BasicMLDataSet
Construct a data set from an input and idea array.
BasicMLDataSet(List<MLDataPair>) - Constructor for class org.encog.ml.data.basic.BasicMLDataSet
Construct a data set from an already created list.
BasicMLDataSet(MLDataSet) - Constructor for class org.encog.ml.data.basic.BasicMLDataSet
Copy whatever dataset type is specified into a memory dataset.
BasicMLDataSet.BasicMLIterator - Class in org.encog.ml.data.basic
An iterator to be used with the BasicMLDataSet.
BasicMLDataSet.BasicMLIterator() - Constructor for class org.encog.ml.data.basic.BasicMLDataSet.BasicMLIterator
 
BasicNetwork - Class in org.encog.neural.networks
This class implements a neural network.
BasicNetwork() - Constructor for class org.encog.neural.networks.BasicNetwork
Construct an empty neural network.
BasicNeuralData - Class in org.encog.neural.data.basic
This is an alias class for Encog 2.5 compatibility.
BasicNeuralData(double[]) - Constructor for class org.encog.neural.data.basic.BasicNeuralData
Construct from a double array.
BasicNeuralData(int) - Constructor for class org.encog.neural.data.basic.BasicNeuralData
Construct to a specific size.
BasicNeuralData(NeuralData) - Constructor for class org.encog.neural.data.basic.BasicNeuralData
Construct from another object.
BasicNeuralDataPair - Class in org.encog.neural.data.basic
This is an alias class for Encog 2.5 compatibility.
BasicNeuralDataPair(NeuralData) - Constructor for class org.encog.neural.data.basic.BasicNeuralDataPair
Construct with input only.
BasicNeuralDataPair(NeuralData, NeuralData) - Constructor for class org.encog.neural.data.basic.BasicNeuralDataPair
Construct from input and ideal.
BasicNeuralDataSet - Class in org.encog.neural.data.basic
This is an alias class for Encog 2.5 compatibility.
BasicNeuralDataSet() - Constructor for class org.encog.neural.data.basic.BasicNeuralDataSet
Construct empty.
BasicNeuralDataSet(double[][], double[][]) - Constructor for class org.encog.neural.data.basic.BasicNeuralDataSet
Construct from 2d arrays.
BasicNeuralDataSet(List<MLDataPair>) - Constructor for class org.encog.neural.data.basic.BasicNeuralDataSet
Construct from another list.
BasicNeuralDataSet(NeuralDataSet) - Constructor for class org.encog.neural.data.basic.BasicNeuralDataSet
Construct from another object.
BasicPNN - Class in org.encog.neural.pnn
This class implements either a: Probabilistic Neural Network (PNN) General Regression Neural Network (GRNN) To use a PNN specify an output mode of classification, to make use of a GRNN specify either an output mode of regression or un-supervised autoassociation.
BasicPNN(PNNKernelType, PNNOutputMode, int, int) - Constructor for class org.encog.neural.pnn.BasicPNN
Construct a BasicPNN network.
BasicPopulation - Class in org.encog.ml.genetic.population
Defines the basic functionality for a population of genomes.
BasicPopulation() - Constructor for class org.encog.ml.genetic.population.BasicPopulation
Construct an empty population.
BasicPopulation(int) - Constructor for class org.encog.ml.genetic.population.BasicPopulation
Construct a population.
BasicRandomizer - Class in org.encog.mathutil.randomize
Provides basic functionality that most randomizers will need.
BasicRandomizer() - Constructor for class org.encog.mathutil.randomize.BasicRandomizer
Construct a random number generator with a random(current time) seed.
BasicRBF - Class in org.encog.mathutil.rbf
Basic radial basis function.
BasicRBF() - Constructor for class org.encog.mathutil.rbf.BasicRBF
 
BasicSpecies - Class in org.encog.ml.genetic.species
Provides basic functionality for a species.
BasicSpecies() - Constructor for class org.encog.ml.genetic.species.BasicSpecies
Default constructor, used mainly for persistence.
BasicSpecies(Population, Genome, long) - Constructor for class org.encog.ml.genetic.species.BasicSpecies
Construct a species.
BasicTraining - Class in org.encog.ml.train
An abstract class that implements basic training for most training algorithms.
BasicTraining(TrainingImplementationType) - Constructor for class org.encog.ml.train.BasicTraining
 
BasicTrainSOM - Class in org.encog.neural.som.training.basic
This class implements competitive training, which would be used in a winner-take-all neural network, such as the self organizing map (SOM).
BasicTrainSOM(SOM, double, MLDataSet, NeighborhoodFunction) - Constructor for class org.encog.neural.som.training.basic.BasicTrainSOM
Create an instance of competitive training.
beginBar(Date) - Method in class org.encog.app.quant.ninja.NinjaStreamWriter
Begin a bar, for the specified date/time.
beginBody() - Method in class org.encog.util.HTMLReport
 
beginDocument() - Method in class org.encog.parse.tags.write.WriteTags
Called to begin the document.
beginHTML() - Method in class org.encog.util.HTMLReport
 
beginList() - Method in class org.encog.util.HTMLReport
 
beginLoad(int, int) - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Begin loading to the binary file.
beginPara() - Method in class org.encog.util.HTMLReport
 
beginRow() - Method in class org.encog.util.HTMLReport
 
beginTable() - Method in class org.encog.util.HTMLReport
 
beginTableInCell(int) - Method in class org.encog.util.HTMLReport
 
beginTag(String) - Method in class org.encog.parse.tags.write.WriteTags
Begin a tag with the specified name.
BestClose - Class in org.encog.app.quant.indicators.predictive
Get the best close.
BestClose(int, boolean) - Constructor for class org.encog.app.quant.indicators.predictive.BestClose
Construct the object.
BestMatchingUnit - Class in org.encog.neural.som.training.basic
The "Best Matching Unit" or BMU is a very important concept in the training for a SOM.
BestMatchingUnit(SOM) - Constructor for class org.encog.neural.som.training.basic.BestMatchingUnit
Construct a BestMatchingUnit class.
BestReturn - Class in org.encog.app.quant.indicators.predictive
Get the best return.
BestReturn(int, boolean) - Constructor for class org.encog.app.quant.indicators.predictive.BestReturn
Construct the object.
bestScore(double, double) - Method in class org.encog.ml.genetic.genome.GenomeComparator
Determine the best score from two scores, uses the "should minimize" property of the score function.
binary2External(File) - Method in class org.encog.ml.data.buffer.BinaryDataLoader
Convert an Encog binary file to an external form, such as CSV.
BinaryDataLoader - Class in org.encog.ml.data.buffer
This class is used, together with a CODEC, to move data to/from the Encog binary training file format.
BinaryDataLoader(DataSetCODEC) - Constructor for class org.encog.ml.data.buffer.BinaryDataLoader
Construct a loader with the specified CODEC.
bipolar2double(boolean) - Static method in class org.encog.mathutil.matrices.BiPolarUtil
Convert a boolean to a bipolar number.
bipolar2double(boolean[]) - Static method in class org.encog.mathutil.matrices.BiPolarUtil
Convert a boolean array to a bipolar array.
bipolar2double(boolean[][]) - Static method in class org.encog.mathutil.matrices.BiPolarUtil
 
BiPolarNeuralData - Class in org.encog.ml.data.specific
A NeuralData implementation designed to work with bipolar data.
BiPolarNeuralData(boolean[]) - Constructor for class org.encog.ml.data.specific.BiPolarNeuralData
Construct this object with the specified data.
BiPolarNeuralData(int) - Constructor for class org.encog.ml.data.specific.BiPolarNeuralData
Construct a data object with the specified size.
BiPolarUtil - Class in org.encog.mathutil.matrices
This class contains a number of utility methods used to work with bipolar numbers.
bold(String) - Method in class org.encog.util.HTMLReport
 
BoltzmannMachine - Class in org.encog.neural.thermal
Implements a Boltzmann machine.
BoltzmannMachine() - Constructor for class org.encog.neural.thermal.BoltzmannMachine
Default constructors.
BoltzmannMachine(int) - Constructor for class org.encog.neural.thermal.BoltzmannMachine
Construct a Boltzmann machine with the specified number of neurons.
BoltzmannPattern - Class in org.encog.neural.pattern
Pattern to create a Boltzmann machine.
BoltzmannPattern() - Constructor for class org.encog.neural.pattern.BoltzmannPattern
 
BotError - Exception in org.encog.bot
Used to represent any error that occurs in the bot part of Encog.
BotError(String) - Constructor for exception org.encog.bot.BotError
Construct a message exception.
BotError(Throwable) - Constructor for exception org.encog.bot.BotError
Construct an exception that holds another exception.
BotUtil - Class in org.encog.bot
Utility class for bots.
bound(double) - Static method in class org.encog.mathutil.BoundNumbers
Bound the number so that it does not become too big or too small.
BoundMath - Class in org.encog.mathutil
Java will sometimes return Math.NaN or Math.Infinity when numbers get to large or too small.
BoundNumbers - Class in org.encog.mathutil
A simple class that prevents numbers from getting either too big or too small.
boxMuller(double, double) - Method in class org.encog.mathutil.randomize.GaussianRandomizer
Compute a Gaussian random number.
BPROPJob - Class in org.encog.neural.networks.training.concurrent.jobs
A training definition for BPROP training.
BPROPJob(BasicNetwork, MLDataSet, boolean, double, double) - Constructor for class org.encog.neural.networks.training.concurrent.jobs.BPROPJob
Construct a job definition for RPROP.
brentmin(int, double, double, double, CalculationCriteria, double) - Method in class org.encog.neural.networks.training.pnn.GlobalMinimumSearch
Use the "Brent Method" to find a better minimum.
BrowseError - Exception in org.encog.bot.browse
Thrown when any sort of error related to web browsing is encountered.
BrowseError(String) - Constructor for exception org.encog.bot.browse.BrowseError
Construct a message exception.
BrowseError(Throwable) - Constructor for exception org.encog.bot.browse.BrowseError
Construct an exception that holds another exception.
Browser - Class in org.encog.bot.browse
The main class for web browsing.
Browser() - Constructor for class org.encog.bot.browse.Browser
 
BUFFER_SIZE - Static variable in class org.encog.bot.BotUtil
How much data to read at once.
BUFFER_SIZE - Static variable in class org.encog.util.file.Directory
Default buffer size for read/write operations.
BUFFER_SIZE - Static variable in class org.encog.util.http.FormUtility
The size of the read buffer.
BufferedDataError - Exception in org.encog.ml.data.buffer
An error occurs working with the Encog binary training format.
BufferedDataError(String) - Constructor for exception org.encog.ml.data.buffer.BufferedDataError
Construct a message exception.
BufferedDataError(Throwable) - Constructor for exception org.encog.ml.data.buffer.BufferedDataError
Construct an exception that holds another exception.
BufferedDataError(String, Throwable) - Constructor for exception org.encog.ml.data.buffer.BufferedDataError
Construct an exception that holds another exception.
BufferedDataSetIterator - Class in org.encog.ml.data.buffer
An iterator for the BufferedNeuralDataSet.
BufferedDataSetIterator(BufferedNeuralDataSet) - Constructor for class org.encog.ml.data.buffer.BufferedDataSetIterator
Construct the iterator.
BufferedNeuralDataSet - Class in org.encog.ml.data.buffer
This class is not memory based, so very long files can be used, without running out of memory.
BufferedNeuralDataSet(File) - Constructor for class org.encog.ml.data.buffer.BufferedNeuralDataSet
Construct the dataset using the specified binary file.

C

C - Variable in class org.encog.mathutil.libsvm.svm_parameter
 
C_SVC - Static variable in class org.encog.mathutil.libsvm.svm_parameter
 
cache_size - Variable in class org.encog.mathutil.libsvm.svm_parameter
 
calcCentroid() - Method in class org.encog.ml.kmeans.Centroid
Calculate the centroid.
calcErrorWithMultipleSigma(double[], double[], double[], boolean) - Method in interface org.encog.neural.networks.training.pnn.CalculationCriteria
Calculate the error with multiple sigmas.
calcErrorWithMultipleSigma(double[], double[], double[], boolean) - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
Calculate the error with multiple sigmas.
calcErrorWithSingleSigma(double) - Method in interface org.encog.neural.networks.training.pnn.CalculationCriteria
Calculate the error with a single sigma.
calcErrorWithSingleSigma(double) - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
Calculate the error using a common sigma.
calcSumOfSquares() - Method in class org.encog.ml.kmeans.KMeansCluster
Calculate the sum of squares.
calculate(Map<String, BaseCachedColumn>, int) - Method in class org.encog.app.quant.indicators.Indicator
Calculate this indicator.
calculate(Map<String, BaseCachedColumn>, int) - Method in class org.encog.app.quant.indicators.MovingAverage
Calculate this indicator.
calculate(Map<String, BaseCachedColumn>, int) - Method in class org.encog.app.quant.indicators.predictive.BestClose
Calculate the indicator.
calculate(Map<String, BaseCachedColumn>, int) - Method in class org.encog.app.quant.indicators.predictive.BestReturn
Calculate the indicator.
calculate() - Method in class org.encog.mathutil.error.ErrorCalculation
Returns the root mean square error for a complete training set.
calculate(double[]) - Method in class org.encog.mathutil.rbf.GaussianFunction
Calculate the result from the function.
calculate(double[]) - Method in class org.encog.mathutil.rbf.InverseMultiquadricFunction
Calculate the RBF result for the specified value.
calculate(double[]) - Method in class org.encog.mathutil.rbf.MexicanHatFunction
Calculate the result from the function.
calculate(double[]) - Method in class org.encog.mathutil.rbf.MultiquadricFunction
Calculate the RBF result for the specified value.
calculate(double[]) - Method in interface org.encog.mathutil.rbf.RadialBasisFunction
Calculate the RBF result for the specified value.
calculate(double[]) - Method in interface org.encog.neural.networks.training.lma.ComputeJacobian
Calculate the Jacobian.
calculate(double[]) - Method in class org.encog.neural.networks.training.lma.JacobianChainRule
Calculate the Jacobian matrix.
calculate(int, double, double, double, CalculationCriteria, int, double[], double, double[], double[], double[], double[], double[]) - Method in class org.encog.neural.networks.training.pnn.DeriveMinimum
Derive the minimum, using a conjugate gradient method.
calculateARCTAN() - Method in class org.encog.mathutil.error.ErrorCalculation
Calculate the error with ARCTAN.
calculateBMU(MLData) - Method in class org.encog.neural.som.training.basic.BestMatchingUnit
Calculate the best matching unit (BMU).
calculateClassificationError(MLClassification, MLDataSet) - Static method in class org.encog.util.simple.EncogUtility
 
calculateEnergy() - Method in class org.encog.neural.thermal.ThermalNetwork
 
calculateError(MLDataSet) - Method in interface org.encog.ml.MLError
Calculate the error of the ML method, given a dataset.
calculateError(MLDataSet) - Method in class org.encog.ml.svm.SVM
Calculate the error for this SVM.
calculateError(MLDataSet) - Method in class org.encog.neural.cpn.CPN
Calculate the error for this neural network.
calculateError(MLDataSet) - Method in class org.encog.neural.flat.FlatNetwork
Calculate the error for this neural network.
calculateError(MLDataSet) - Method in class org.encog.neural.neat.NEATNetwork
Calculate the error for this neural network.
calculateError(MLDataSet) - Method in class org.encog.neural.networks.BasicNetwork
Calculate the error for this neural network.
calculateError(MLDataSet, boolean) - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
Calculate the error for the entire training set.
calculateError(MLDataSet) - Method in class org.encog.neural.rbf.RBFNetwork
Calculate the error for this neural network.
calculateError(MLDataSet) - Method in class org.encog.neural.som.SOM
Calculate the error of the ML method, given a dataset.
calculateError(MLRegression, MLDataSet) - Static method in class org.encog.util.error.CalculateRegressionError
 
calculateEuclideanDistance(Centroid, MLData) - Static method in class org.encog.ml.kmeans.KMeansClustering
Calculate the euclidean distance between a centroid and data.
calculateEuclideanDistance(Matrix, MLData, int) - Method in class org.encog.neural.som.training.basic.BestMatchingUnit
Calculate the Euclidean distance for the specified output neuron and the input vector.
calculateGeneCount() - Method in class org.encog.ml.genetic.genome.BasicGenome
 
calculateGeneCount() - Method in interface org.encog.ml.genetic.genome.Genome
 
CalculateGenomeScore - Interface in org.encog.ml.genetic.genome
Genetic Algorithms need a class to calculate the score.
calculateGradients() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
Calculate the gradients.
calculateGradients() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkSCG
Calculate the gradients.
calculateHessian(double[][], double[]) - Method in class org.encog.neural.networks.training.lma.LevenbergMarquardtTraining
Calculate the Hessian matrix.
calculateInputColumns() - Method in class org.encog.app.analyst.script.normalize.AnalystNormalize
 
calculateMSE() - Method in class org.encog.mathutil.error.ErrorCalculation
Calculate the error with MSE.
calculateNeuronCount() - Method in class org.encog.neural.networks.BasicNetwork
Calculate the total number of neurons in the network across all layers.
calculateOutputColumns() - Method in class org.encog.app.analyst.script.normalize.AnalystNormalize
Calculate the output columns.
CalculateRegressionError - Class in org.encog.util.error
 
CalculateRegressionError() - Constructor for class org.encog.util.error.CalculateRegressionError
 
calculateRegressionError(MLRegression, MLDataSet) - Static method in class org.encog.util.simple.EncogUtility
 
calculateRMS() - Method in class org.encog.mathutil.error.ErrorCalculation
Calculate the error with RMS.
calculateScore() - Method in class org.encog.ml.anneal.SimulatedAnnealing
Subclasses should provide a method that evaluates the score for the current solution.
calculateScore(Genome) - Method in class org.encog.ml.genetic.GeneticAlgorithm
Calculate the score for this genome.
calculateScore(Genome) - Method in interface org.encog.ml.genetic.genome.CalculateGenomeScore
Calculate this genome's score.
calculateScore() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealingHelper
Used to pass the determineError call on to the parent object.
CalculateScore - Interface in org.encog.neural.networks.training
Used by simulated annealing and genetic algorithms to calculate the score for a neural network.
calculateScore(MLRegression) - Method in interface org.encog.neural.networks.training.CalculateScore
Calculate this network's score.
calculateScore(Genome) - Method in class org.encog.neural.networks.training.genetic.GeneticScoreAdapter
Calculate the genome's score.
calculateScore(MLRegression) - Method in class org.encog.neural.networks.training.TrainingSetScore
Calculate the score for the network.
calculateSize() - Method in class org.encog.neural.networks.structure.NeuralStructure
Calculate the size that an array should be to hold all of the weights and bias values.
calculateSpawnAmount() - Method in class org.encog.ml.genetic.species.BasicSpecies
Calculate the amount to spawn.
calculateSpawnAmount() - Method in interface org.encog.ml.genetic.species.Species
Calculate the amount that a species will spawn.
calculateWorkers() - Method in class org.encog.util.concurrency.DetermineWorkload
Calculate the high and low ranges for each worker.
CalculationCriteria - Interface in org.encog.neural.networks.training.pnn
Calculate criteria.
canContinue() - Method in class org.encog.ml.svm.training.SVMSearchTrain
canContinue() - Method in class org.encog.ml.svm.training.SVMTrain
canContinue() - Method in interface org.encog.ml.train.MLTrain
 
canContinue() - Method in class org.encog.neural.cpn.training.TrainInstar
canContinue() - Method in class org.encog.neural.cpn.training.TrainOutstar
canContinue() - Method in class org.encog.neural.neat.training.NEATTraining
 
canContinue() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealing
canContinue() - Method in class org.encog.neural.networks.training.cross.CrossValidationKFold
canContinue() - Method in class org.encog.neural.networks.training.genetic.NeuralGeneticAlgorithm
canContinue() - Method in class org.encog.neural.networks.training.lma.LevenbergMarquardtTraining
 
canContinue() - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
canContinue() - Method in class org.encog.neural.networks.training.propagation.back.Backpropagation
canContinue() - Method in class org.encog.neural.networks.training.propagation.manhattan.ManhattanPropagation
This training type does not support training continue.
canContinue() - Method in class org.encog.neural.networks.training.propagation.resilient.ResilientPropagation
 
canContinue() - Method in class org.encog.neural.networks.training.propagation.scg.ScaledConjugateGradient
This training type does not support training continue.
canContinue() - Method in class org.encog.neural.networks.training.simple.TrainAdaline
canContinue() - Method in class org.encog.neural.rbf.training.SVDTraining
 
canContinue() - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
canContinue() - Method in class org.encog.neural.som.training.clustercopy.SOMClusterCopyTraining
CANT_DEFINE_ACT - Static variable in class org.encog.ml.factory.method.FeedforwardFactory
Error.
CDATA_BEGIN - Static variable in class org.encog.parse.tags.TagConst
The beginning of a CDATA section.
CDATA_END - Static variable in class org.encog.parse.tags.TagConst
THe end of a CDATA section.
cell(String) - Method in class org.encog.util.HTMLReport
 
cell(String, int) - Method in class org.encog.util.HTMLReport
 
Centroid - Class in org.encog.ml.kmeans
The centers of each cluster.
Centroid(double[]) - Constructor for class org.encog.ml.kmeans.Centroid
Construct the centroid.
CGOLD - Static variable in class org.encog.neural.networks.training.pnn.GlobalMinimumSearch
The golden section.
changeNeuronCount(int, int) - Method in class org.encog.neural.prune.PruneSelective
Change the neuron count for the network.
CHAR_BULLET - Static variable in class org.encog.parse.tags.read.ReadTags
The bullet character.
CHAR_TRADEMARK - Static variable in class org.encog.parse.tags.read.ReadTags
The bullet character.
CharGene - Class in org.encog.ml.genetic.genes
A gene that holds a single character.
CharGene() - Constructor for class org.encog.ml.genetic.genes.CharGene
 
checkError() - Method in class org.encog.util.concurrency.EngineConcurrency
Check to see if one of the threads has thrown an error.
checkInnovation(long, long, NEATInnovationType) - Method in class org.encog.neural.neat.training.NEATInnovationList
Check to see if we already have an innovation.
CholeskyDecomposition - Class in org.encog.mathutil.matrices.decomposition
Cholesky Decomposition.
CholeskyDecomposition(Matrix) - Constructor for class org.encog.mathutil.matrices.decomposition.CholeskyDecomposition
Cholesky algorithm for symmetric and positive definite matrix.
chooseParent() - Method in class org.encog.ml.genetic.species.BasicSpecies
Choose a parent to mate.
chooseParent() - Method in interface org.encog.ml.genetic.species.Species
Choose a worthy parent for mating.
Chromosome - Class in org.encog.ml.genetic.genome
Implements a chromosome to genetic algorithm.
Chromosome() - Constructor for class org.encog.ml.genetic.genome.Chromosome
 
claim(GeneticAlgorithm) - Method in class org.encog.ml.genetic.population.BasicPopulation
Claim the population, before training.
claim(GeneticAlgorithm) - Method in interface org.encog.ml.genetic.population.Population
Claim the population, before training.
classify(MLData) - Method in interface org.encog.ml.MLClassification
Classify the input into a group.
classify(MLData) - Method in class org.encog.ml.svm.SVM
Classify the input into a group.
classify(MLData) - Method in class org.encog.neural.art.ART1
Classify the input data to a class number.
classify(MLData) - Method in class org.encog.neural.networks.BasicNetwork
Classify the input into a group.
classify(MLData) - Method in class org.encog.neural.som.SOM
Classify the input into a group.
ClassItem - Class in org.encog.util.arrayutil
A class item.
ClassItem(String, int) - Constructor for class org.encog.util.arrayutil.ClassItem
Construct the object.
clear() - Method in class org.encog.mathutil.matrices.Matrix
Set all rows and columns to zero.
clear() - Method in class org.encog.ml.data.basic.BasicMLData
Clear any data to zero.
clear() - Method in interface org.encog.ml.data.MLData
Clear any data to zero.
clear() - Method in class org.encog.ml.data.specific.BiPolarNeuralData
Set all data to false.
clear() - Method in class org.encog.ml.genetic.population.BasicPopulation
Clear all genomes from this population.
clear() - Method in interface org.encog.ml.genetic.population.Population
Clear all genomes from this population.
clear() - Method in class org.encog.neural.bam.BAM
Clear any connection weights.
clear() - Method in class org.encog.neural.pattern.ADALINEPattern
Clear out any parameters.
clear() - Method in class org.encog.neural.pattern.ART1Pattern
Clear any properties set for this network.
clear() - Method in class org.encog.neural.pattern.BAMPattern
Clear any settings on the pattern.
clear() - Method in class org.encog.neural.pattern.BoltzmannPattern
Clear any properties set on this network.
clear() - Method in class org.encog.neural.pattern.CPNPattern
Clear any parameters that were set.
clear() - Method in class org.encog.neural.pattern.ElmanPattern
Clear out any hidden neurons.
clear() - Method in class org.encog.neural.pattern.FeedForwardPattern
Clear out any hidden neurons.
clear() - Method in class org.encog.neural.pattern.HopfieldPattern
Nothing to clear.
clear() - Method in class org.encog.neural.pattern.JordanPattern
Clear out any hidden neurons.
clear() - Method in interface org.encog.neural.pattern.NeuralNetworkPattern
Clear the hidden layers so that they can be redefined.
clear() - Method in class org.encog.neural.pattern.PNNPattern
Clear out any hidden neurons.
clear() - Method in class org.encog.neural.pattern.RadialBasisPattern
Clear out any hidden neurons.
clear() - Method in class org.encog.neural.pattern.SOMPattern
Clear out any hidden neurons.
clear() - Method in class org.encog.neural.pattern.SVMPattern
Clear any settings on the pattern.
clear() - Method in class org.encog.neural.thermal.ThermalNetwork
Clear any connection weights.
clear() - Method in class org.encog.parse.tags.Tag
Clear the name, type and attributes.
clear() - Method in class org.encog.util.HTMLReport
 
clearConnectionLimit() - Method in class org.encog.neural.flat.FlatNetwork
Clear any connection limits.
clearContext() - Method in interface org.encog.ml.MLContext
Clear the context.
clearContext() - Method in class org.encog.neural.flat.FlatNetwork
Clear any context neurons.
clearContext() - Method in class org.encog.neural.neat.NEATNetwork
Clear any context from previous runs.
clearContext() - Method in class org.encog.neural.networks.BasicNetwork
Clear any data from any context layers.
clearFilenames() - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Clear out all filenames.
clearPerformers() - Method in class org.encog.neural.networks.training.concurrent.ConcurrentTrainingManager
Clear all of the performers.
clearQueue() - Method in class org.encog.neural.networks.training.concurrent.ConcurrentTrainingManager
Clear the workload.
clearTasks() - Method in class org.encog.app.analyst.script.AnalystScript
Clear all tasks.
clone() - Method in class org.encog.engine.network.activation.ActivationBiPolar
 
clone() - Method in class org.encog.engine.network.activation.ActivationCompetitive
 
clone() - Method in interface org.encog.engine.network.activation.ActivationFunction
 
clone() - Method in class org.encog.engine.network.activation.ActivationGaussian
 
clone() - Method in class org.encog.engine.network.activation.ActivationLinear
 
clone() - Method in class org.encog.engine.network.activation.ActivationLOG
 
clone() - Method in class org.encog.engine.network.activation.ActivationRamp
Clone the object.
clone() - Method in class org.encog.engine.network.activation.ActivationSigmoid
 
clone() - Method in class org.encog.engine.network.activation.ActivationSIN
 
clone() - Method in class org.encog.engine.network.activation.ActivationSoftMax
 
clone() - Method in class org.encog.engine.network.activation.ActivationStep
 
clone() - Method in class org.encog.engine.network.activation.ActivationTANH
 
clone() - Method in class org.encog.mathutil.libsvm.svm_parameter
 
clone() - Method in class org.encog.mathutil.matrices.Matrix
Create a copy of the matrix.
clone() - Method in class org.encog.ml.data.basic.BasicMLData
Clone this object.
clone() - Method in class org.encog.ml.data.basic.BasicMLDataSet
clone() - Method in interface org.encog.ml.data.MLData
Clone this object.
clone() - Method in class org.encog.ml.data.specific.BiPolarNeuralData
 
clone() - Method in class org.encog.neural.flat.FlatNetwork
Clone the network.
clone() - Method in class org.encog.neural.flat.FlatNetworkRBF
Clone the network.
clone() - Method in class org.encog.neural.networks.BasicNetwork
Return a clone of this neural network.
clone() - Method in class org.encog.parse.tags.Tag
 
cloneFlatNetwork(FlatNetwork) - Method in class org.encog.neural.flat.FlatNetwork
Clone into the flat network passed in.
CLOSE - Static variable in class org.encog.app.analyst.csv.basic.FileData
The close value.
close() - Method in class org.encog.app.quant.ninja.NinjaStreamWriter
Close the file.
close() - Method in class org.encog.ml.data.basic.BasicMLDataSet
Close this datasource and release any resources obtained by it, including any iterators created.
close() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Close the dataset.
close() - Method in class org.encog.ml.data.buffer.codec.ArrayDataCODEC
Close any open files.
close() - Method in class org.encog.ml.data.buffer.codec.CSVDataCODEC
Close any open files.
close() - Method in interface org.encog.ml.data.buffer.codec.DataSetCODEC
Close any open files.
close() - Method in class org.encog.ml.data.buffer.codec.ExcelCODEC
Close any open files.
close() - Method in class org.encog.ml.data.buffer.codec.NeuralDataSetCODEC
Close any open files.
close() - Method in class org.encog.ml.data.buffer.codec.SQLCODEC
Close any open files.
close() - Method in class org.encog.ml.data.buffer.EncogEGBFile
Close the file.
close() - Method in class org.encog.ml.data.folded.FoldedDataSet
Close the dataset.
close() - Method in interface org.encog.ml.data.MLDataSet
Close this datasource and release any resources obtained by it, including any iterators created.
close() - Method in class org.encog.parse.tags.write.WriteTags
Close this object.
close() - Method in class org.encog.persist.EncogReadHelper
Close the file.
close() - Method in class org.encog.util.csv.ReadCSV
Close the file.
CLUSTER_CONFIG_CLUSTERS - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "CLUSTER:CONFIG_clusters".
CLUSTER_CONFIG_SOURCE_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "CLUSTER:CONFIG_sourceFile".
CLUSTER_CONFIG_TARGET_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "CLUSTER:CONFIG_targetFile".
CLUSTER_CONFIG_TYPE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "CLUSTER:CONFIG_type".
ClusterRow - Class in org.encog.app.analyst.csv
Holds input data and the CSV row for a cluster item.
ClusterRow(double[], LoadedRow) - Constructor for class org.encog.app.analyst.csv.ClusterRow
Construct the cluster row.
ClusterSOMFactory - Class in org.encog.ml.factory.train
Create a trainer that uses the SOM cluster training method.
ClusterSOMFactory() - Constructor for class org.encog.ml.factory.train.ClusterSOMFactory
 
Cmd - Class in org.encog.app.analyst.commands
Base class for Encog Analyst commands.
Cmd(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.Cmd
Construct this command.
CmdBalance - Class in org.encog.app.analyst.commands
Performs the balance command.
CmdBalance(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdBalance
Construct the balance command.
CmdCluster - Class in org.encog.app.analyst.commands
This command is used to randomize the lines in a CSV file.
CmdCluster(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdCluster
Construct the cluster command.
CmdCreate - Class in org.encog.app.analyst.commands
The Encog Analyst create command.
CmdCreate(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdCreate
Construct the create command.
CmdEvaluate - Class in org.encog.app.analyst.commands
This class is used to evaluate a machine learning method.
CmdEvaluate(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdEvaluate
Construct the evaluate command.
CmdEvaluateRaw - Class in org.encog.app.analyst.commands
This class is used to evaluate a machine learning method.
CmdEvaluateRaw(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdEvaluateRaw
Construct an evaluate raw command.
CmdGenerate - Class in org.encog.app.analyst.commands
This command is used to generate the binary EGB file from a CSV file.
CmdGenerate(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdGenerate
Construct this generate command.
CmdNormalize - Class in org.encog.app.analyst.commands
The normalize command is used to normalize data.
CmdNormalize(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdNormalize
Construct the normalize command.
CmdRandomize - Class in org.encog.app.analyst.commands
This command is used to randomize the lines in a CSV file.
CmdRandomize(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdRandomize
Construct the randomize command.
CmdReset - Class in org.encog.app.analyst.commands
Analyst command that allows all properties to be reset to what they were originally loaded from the Encog EGA file.
CmdReset(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdReset
Construct the reset command.
CmdSegregate - Class in org.encog.app.analyst.commands
This command is used to segregate one CSV file into several.
CmdSegregate(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdSegregate
Construct the segregate command.
CmdSet - Class in org.encog.app.analyst.commands
The set command allows a script to override a property value.
CmdSet(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdSet
Construct the set command with the analyst.
CmdTrain - Class in org.encog.app.analyst.commands
This command is used to perform training on a machine learning method and dataset.
CmdTrain(EncogAnalyst) - Constructor for class org.encog.app.analyst.commands.CmdTrain
Construct the train command.
code(TimeUnit) - Method in class org.encog.util.time.EnglishTimeUnitNames
Get the code for a TimeUnit.
code(TimeUnit) - Method in interface org.encog.util.time.TimeUnitNames
Get the code for the specified time unit.
CodeDataUnit - Class in org.encog.bot.dataunit
A data unit that holds code.
CodeDataUnit() - Constructor for class org.encog.bot.dataunit.CodeDataUnit
 
coef0 - Variable in class org.encog.mathutil.libsvm.svm_parameter
 
COLUMN_FIVE - Static variable in class org.encog.app.analyst.script.ScriptLoad
Column 5.
COLUMN_FOUR - Static variable in class org.encog.app.analyst.script.ScriptLoad
Column 4.
COLUMN_ONE - Static variable in class org.encog.app.analyst.script.ScriptLoad
Column 1.
COLUMN_THREE - Static variable in class org.encog.app.analyst.script.ScriptLoad
Column 3.
COLUMN_TWO - Static variable in class org.encog.app.analyst.script.ScriptLoad
Column 2.
combine(long, int) - Static method in class org.encog.util.time.NumericDateUtil
 
COMMA - Static variable in class org.encog.persist.EncogWriteHelper
A comma char.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdBalance
The name of this command.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdCluster
The name of this command.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdCreate
The name of this command.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdEvaluate
The name of this command.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdEvaluateRaw
The name of the command.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdGenerate
The name of this command.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdNormalize
The name of this command.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdRandomize
The name of the command.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdReset
The name of this command.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdSegregate
The name of this command.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdSet
The name of this command.
COMMAND_NAME - Static variable in class org.encog.app.analyst.commands.CmdTrain
The name of this command.
COMMENT_BEGIN - Static variable in class org.encog.parse.tags.TagConst
The beginning of a comment.
COMMENT_END - Static variable in class org.encog.parse.tags.TagConst
The end of a comment.
compare(LoadedRow, LoadedRow) - Method in class org.encog.app.analyst.csv.sort.RowComparator
Compare two LoadedRow objects.
compare(Genome, Genome) - Method in class org.encog.ml.genetic.genome.GenomeComparator
Compare two genomes.
compareTo(AnalystClassItem) - Method in class org.encog.app.analyst.script.AnalystClassItem
compareTo(PropertyEntry) - Method in class org.encog.app.analyst.script.prop.PropertyEntry
compareTo(Gene) - Method in class org.encog.ml.genetic.genes.BasicGene
compareTo(Genome) - Method in class org.encog.ml.genetic.genome.BasicGenome
complete() - Method in class org.encog.util.http.FormUtility
Complete the building of the form.
completePass1() - Method in class org.encog.app.analyst.analyze.AnalyzedField
Complete pass 1.
completePass2() - Method in class org.encog.app.analyst.analyze.AnalyzedField
Complete pass 2.
compute(MLData) - Method in interface org.encog.ml.MLRegression
Compute regression.
compute(MLData) - Method in class org.encog.ml.svm.SVM
Compute the output for the given input.
compute(BiPolarNeuralData, BiPolarNeuralData) - Method in class org.encog.neural.art.ART1
Compute the output from the ART1 network.
compute(MLData) - Method in class org.encog.neural.art.ART1
Compute the output for the BasicNetwork class.
compute(MLData) - Method in class org.encog.neural.bam.BAM
Setup the network logic, read parameters from the network.
compute(NeuralDataMapping) - Method in class org.encog.neural.bam.BAM
Compute the network for the specified input.
compute(MLData) - Method in class org.encog.neural.cpn.CPN
Compute regression.
compute(double[], double[]) - Method in class org.encog.neural.flat.FlatNetwork
Calculate the output for the given input.
compute(double[], double[]) - Method in class org.encog.neural.flat.FlatNetworkRBF
Calculate the output for the given input.
compute(MLData) - Method in class org.encog.neural.neat.NEATNetwork
Compute the output from this synapse.
compute(double[], double[]) - Method in class org.encog.neural.networks.BasicNetwork
Compute the output for this network.
compute(MLData) - Method in class org.encog.neural.networks.BasicNetwork
Compute the output for a given input to the neural network.
compute(MLData) - Method in class org.encog.neural.pnn.AbstractPNN
Compute the output from the network.
compute(MLData) - Method in class org.encog.neural.pnn.BasicPNN
Compute the output from this network.
compute(MLData) - Method in class org.encog.neural.rbf.RBFNetwork
Compute regression.
compute(MLData) - Method in class org.encog.neural.som.SOM
Determine the winner for the specified input.
compute(MLData) - Method in class org.encog.neural.thermal.BoltzmannMachine
Note: for Boltzmann networks, you will usually want to call the "run" method to compute the output.
compute(MLData) - Method in class org.encog.neural.thermal.HopfieldNetwork
Note: for Hopfield networks, you will usually want to call the "run" method to compute the output.
computeDeriv(MLData, MLData) - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
Compute the derivative for target data.
computeInstar(MLData) - Method in class org.encog.neural.cpn.CPN
Compute the instar layer.
ComputeJacobian - Interface in org.encog.neural.networks.training.lma
Calculate the Jacobian.
computeLayer(int) - Method in class org.encog.neural.flat.FlatNetwork
Calculate a layer.
computeOutstar(MLData) - Method in class org.encog.neural.cpn.CPN
Compute the outstar layer.
ConcurrentJob - Class in org.encog.util.concurrency.job
This class forms the basis for a job that can be run concurrently.
ConcurrentJob(StatusReportable) - Constructor for class org.encog.util.concurrency.job.ConcurrentJob
Construct a concurrent job.
ConcurrentTrainingManager - Class in org.encog.neural.networks.training.concurrent
Concurrent training manager.
ConcurrentTrainingPerformer - Interface in org.encog.neural.networks.training.concurrent.performers
Performers actually perform the training.
ConcurrentTrainingPerformerCPU - Class in org.encog.neural.networks.training.concurrent.performers
This performer allows jobs to be performed by the CPU.
ConcurrentTrainingPerformerCPU(int) - Constructor for class org.encog.neural.networks.training.concurrent.performers.ConcurrentTrainingPerformerCPU
Construct the performer.
cond() - Method in class org.encog.mathutil.matrices.decomposition.SingularValueDecomposition
Two norm condition number
ConsistentRandomizer - Class in org.encog.mathutil.randomize
A randomizer that takes a seed and will always produce consistent results.
ConsistentRandomizer(double, double) - Constructor for class org.encog.mathutil.randomize.ConsistentRandomizer
Construct a range randomizer.
ConsistentRandomizer(double, double, int) - Constructor for class org.encog.mathutil.randomize.ConsistentRandomizer
Construct a range randomizer.
ConsoleAnalystListener - Class in org.encog.app.analyst
A console implementation of the Encog Analyst listener.
ConsoleAnalystListener() - Constructor for class org.encog.app.analyst.ConsoleAnalystListener
 
ConsoleStatusReportable - Class in org.encog
A simple status report that goes to the console.
ConsoleStatusReportable() - Constructor for class org.encog.ConsoleStatusReportable
 
ConstRandomizer - Class in org.encog.mathutil.randomize
A randomizer that will create always set the random number to a const value, used mainly for testing.
ConstRandomizer(double) - Constructor for class org.encog.mathutil.randomize.ConstRandomizer
Construct a range randomizer.
constructURL(URL, String, boolean) - Static method in class org.encog.util.http.URLUtility
Construct a URL from its basic parts.
contains(int[], int) - Static method in class org.encog.util.EngineArray
 
ContainsFlat - Interface in org.encog.neural.networks
Interface that specifies that a machine learning method contains a flat network.
containsInvalidURLCharacters(String) - Static method in class org.encog.util.http.URLUtility
Returns true if the URL contains any invalid characters.
Convert - Class in org.encog.mathutil
This class is used to convert strings into numeric values.
convertCSV2Binary(File, File, int, int, boolean) - Static method in class org.encog.util.simple.EncogUtility
Convert a CSV file to a binary training file.
convertCSV2Binary(String, String, int, int, boolean) - Static method in class org.encog.util.simple.EncogUtility
Convert a CSV file to a binary training file.
convertCSV2Binary(File, CSVFormat, File, int[], int[], boolean) - Static method in class org.encog.util.simple.EncogUtility
 
convertFilename(String, URL, boolean) - Static method in class org.encog.util.http.URLUtility
Convert a filename for local storage.
ConvertStringConst - Class in org.encog.app.analyst.util
Convert several Analyst String to the correct object.
convertToCSVFormat(AnalystFileFormat) - Static method in class org.encog.app.analyst.util.ConvertStringConst
Convert an analyst format to a csv format.
CookieUtility - Class in org.encog.util.http
This class allows URLConnection objects to process cookies.
CookieUtility() - Constructor for class org.encog.util.http.CookieUtility
 
copy(Matrix, Matrix) - Static method in class org.encog.mathutil.matrices.MatrixMath
Copy from one matrix to another.
copy(Gene) - Method in class org.encog.ml.genetic.genes.CharGene
Copy another gene to this gene.
copy(Gene) - Method in class org.encog.ml.genetic.genes.DoubleGene
Copy another gene to this one.
copy(Gene) - Method in interface org.encog.ml.genetic.genes.Gene
Copy another gene to this one.
copy(Gene) - Method in class org.encog.ml.genetic.genes.IntegerGene
Copy another gene to this one.
copy(Gene) - Method in class org.encog.neural.neat.training.NEATLinkGene
Copy from another gene.
copy(Gene) - Method in class org.encog.neural.neat.training.NEATNeuronGene
Copy another gene to this one.
copy(NeuralDataMapping, NeuralDataMapping) - Static method in class org.encog.neural.networks.NeuralDataMapping
Copy from one object to the other.
copy(File, File) - Static method in class org.encog.util.file.FileUtil
 
copy(InputStream, OutputStream) - Static method in class org.encog.util.file.FileUtil
 
copyFile(File, File) - Static method in class org.encog.util.file.Directory
Copy the specified file.
copyFromNetwork(FlatNetwork) - Method in class org.encog.neural.networks.training.cross.NetworkFold
Copy the weights and output from the network.
copyResource(String, File) - Static method in class org.encog.util.file.FileUtil
 
copyToNetwork(FlatNetwork) - Method in class org.encog.neural.networks.training.cross.NetworkFold
Copy weights and output to the network.
cos(double) - Static method in class org.encog.mathutil.BoundMath
Calculate the cos.
countActiveFields() - Method in class org.encog.app.analyst.script.normalize.AnalystNormalize
 
countInputFields() - Method in class org.encog.util.arrayutil.TemporalWindowArray
Count the number of input fields, or fields used to predict.
countPredictFields() - Method in class org.encog.util.arrayutil.TemporalWindowArray
Count the number of fields that are that are in the prediction.
CPN - Class in org.encog.neural.cpn
Counterpropagation Neural Networks (CPN) were developed by Professor Robert Hecht-Nielsen in 1987.
CPN(int, int, int, int) - Constructor for class org.encog.neural.cpn.CPN
Construct the counterpropagation neural network.
CPNPattern - Class in org.encog.neural.pattern
Pattern that creates a CPN neural network.
CPNPattern() - Constructor for class org.encog.neural.pattern.CPNPattern
 
create(int, int) - Method in class org.encog.ml.data.buffer.EncogEGBFile
Create a new RGB file.
create(String, int, int) - Method in class org.encog.ml.factory.method.FeedforwardFactory
Create a feed forward network.
create(String, int, int) - Method in class org.encog.ml.factory.method.PNNFactory
Create a PNN network.
create(String, int, int) - Method in class org.encog.ml.factory.method.RBFNetworkFactory
Create a RBF network.
create(String, int, int) - Method in class org.encog.ml.factory.method.SOMFactory
Create a SOM.
create(String, int, int) - Method in class org.encog.ml.factory.method.SRNFactory
Create the SRN.
create(String, int, int) - Method in class org.encog.ml.factory.method.SVMFactory
Create the SVM.
create(String, String, int, int) - Method in class org.encog.ml.factory.MLMethodFactory
Create a new machine learning method.
create(MLMethod, MLDataSet, String, String) - Method in class org.encog.ml.factory.MLTrainFactory
Create a trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.AnnealFactory
Create an annealing trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.BackPropFactory
Create a backpropagation trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.ClusterSOMFactory
Create a cluster SOM trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.GeneticFactory
Create an annealing trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.LMAFactory
Create a LMA trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.ManhattanFactory
Create a Manhattan trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.NeighborhoodSOMFactory
Create a LMA trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.PNNTrainFactory
Create a PNN trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.RBFSVDFactory
Create a RBF-SVD trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.RPROPFactory
Create a RPROP trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.SCGFactory
Create a SCG trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.SVMFactory
Create a SVM trainer.
create(MLMethod, MLDataSet, String) - Method in class org.encog.ml.factory.train.SVMSearchFactory
Create a SVM trainer.
createColumnMatrix(double[]) - Static method in class org.encog.mathutil.matrices.Matrix
Turn an array of doubles into a column matrix.
createDataSet() - Method in class org.encog.ml.kmeans.KMeansCluster
Create a dataset from the clustered data.
createDataSet() - Method in interface org.encog.ml.MLCluster
Create a machine learning dataset from the data.
createDate(int, int, int) - Static method in class org.encog.util.time.DateUtil
Create a Date object with the specified date.
createInputStream(String) - Static method in class org.encog.util.ResourceLoader
Create an input stream to read from the resource.
createNeuronFromID(long) - Method in class org.encog.neural.neat.training.NEATInnovationList
Create a new neuron gene from an id.
createNewInnovation(long, long, NEATInnovationType) - Method in class org.encog.neural.neat.training.NEATInnovationList
Create a new innovation.
createNewInnovation(long, long, NEATInnovationType, NEATNeuronType, double, double) - Method in class org.encog.neural.neat.training.NEATInnovationList
Create a new innovation.
createPair(int, int) - Static method in class org.encog.ml.data.basic.BasicMLDataPair
Create a new data pair object of the correct size for the machine learning method that is being trained.
createRowMatrix(double[]) - Static method in class org.encog.mathutil.matrices.Matrix
Turn an array of doubles into a row matrix.
createTaskGroup() - Method in class org.encog.util.concurrency.EngineConcurrency
Create a new task group.
createTrainer(boolean) - Method in class org.encog.neural.networks.training.concurrent.jobs.BPROPJob
Create a trainer to use.
createTrainer(boolean) - Method in class org.encog.neural.networks.training.concurrent.jobs.RPROPJob
Create a trainer to use.
createTrainer(boolean) - Method in class org.encog.neural.networks.training.concurrent.jobs.TrainingJob
Create a trainer to use.
Crossover - Interface in org.encog.ml.genetic.crossover
Specifies how "crossover" or mating happens.
crossover(NEATGenome, NEATGenome) - Method in class org.encog.neural.neat.training.NEATTraining
Perform the crossover.
CrossTraining - Class in org.encog.neural.networks.training.cross
Base class for cross training trainers.
CrossTraining(MLMethod, FoldedDataSet) - Constructor for class org.encog.neural.networks.training.cross.CrossTraining
Construct a cross trainer.
CrossValidationKFold - Class in org.encog.neural.networks.training.cross
Train using K-Fold cross validation.
CrossValidationKFold(MLTrain, int) - Constructor for class org.encog.neural.networks.training.cross.CrossValidationKFold
Construct a cross validation trainer.
CSVDataCODEC - Class in org.encog.ml.data.buffer.codec
A CODEC used to read/write data from/to a CSV data file.
CSVDataCODEC(File, CSVFormat) - Constructor for class org.encog.ml.data.buffer.codec.CSVDataCODEC
Constructor to create CSV from binary..
CSVDataCODEC(File, CSVFormat, boolean, int, int) - Constructor for class org.encog.ml.data.buffer.codec.CSVDataCODEC
Create a CODEC to load data from CSV to binary.
CSVError - Exception in org.encog.util.csv
An error has occured while working with CSV data.
CSVError(String) - Constructor for exception org.encog.util.csv.CSVError
Construct a message exception.
CSVError(Throwable) - Constructor for exception org.encog.util.csv.CSVError
Construct an exception that holds another exception.
CSVFormat - Class in org.encog.util.csv
Specifies a CSV format.
CSVFormat() - Constructor for class org.encog.util.csv.CSVFormat
By default use USA conventions.
CSVFormat(char, char) - Constructor for class org.encog.util.csv.CSVFormat
Construct a CSV format with he specified decimal and separator characters.
CSVHeaders - Class in org.encog.app.analyst.util
Utility class to help deal with CSV headers.
CSVHeaders(File, boolean, CSVFormat) - Constructor for class org.encog.app.analyst.util.CSVHeaders
Construct the object.
CSVHeaders(List<String>) - Constructor for class org.encog.app.analyst.util.CSVHeaders
Construct the object.
CSVHeaders(String[]) - Constructor for class org.encog.app.analyst.util.CSVHeaders
Construct the object.
CSVNeuralDataSet - Class in org.encog.ml.data.specific
An implementation of the NeuralDataSet interface designed to provide a CSV file to the neural network.
CSVNeuralDataSet(String, int, int, boolean) - Constructor for class org.encog.ml.data.specific.CSVNeuralDataSet
Construct this data set using a comma as a delimiter.
CSVNeuralDataSet(String, int, int, boolean, CSVFormat) - Constructor for class org.encog.ml.data.specific.CSVNeuralDataSet
Construct this data set using a comma as a delimiter.
currentError - Variable in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
The current error is the average error over all of the threads.
currentLevel - Static variable in class org.encog.util.logging.EncogLogging
 
CUT - Static variable in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealing
The cutoff for random data.
CYCLES - Static variable in class org.encog.ml.factory.MLTrainFactory
The number of cycles.

D

DATA - Static variable in class org.encog.persist.PersistConst
Data.
DATA_CONFIG_GOAL - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "DATA:CONFIG_goal".
DataField - Class in org.encog.app.analyst.script
Holds stats on a data field for the Encog Analyst.
DataField(String) - Constructor for class org.encog.app.analyst.script.DataField
Construct the data field.
DataSetCODEC - Interface in org.encog.ml.data.buffer.codec
A CODEC is used to encode and decode data.
DataUnit - Class in org.encog.bot.dataunit
Data units are very abstract pieces of data that the browser processes.
DataUnit() - Constructor for class org.encog.bot.dataunit.DataUnit
 
DATE - Static variable in class org.encog.app.analyst.csv.basic.FileData
The date.
date2Long(Date) - Static method in class org.encog.util.time.NumericDateUtil
 
DateUtil - Class in org.encog.util.time
Simple date utility class.
DAYS_WEEK - Static variable in class org.encog.util.time.TimeSpan
Days in a week.
decay(double) - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
Called to decay the learning rate and radius by the specified amount.
decay(double, double) - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
Decay the learning rate and radius by the specified amount.
DECIMAL_COMMA - Static variable in class org.encog.util.csv.CSVFormat
Use a decimal comma, and a semicolon to separate numbers.
DECIMAL_POINT - Static variable in class org.encog.util.csv.CSVFormat
Use a decimal point, and a comma to separate numbers.
decode(double[]) - Method in class org.encog.mathutil.Equilateral
Decode a set of activations and see which set it has the lowest Euclidean distance from.
decode() - Method in interface org.encog.ml.genetic.genome.Genome
Use the genes to update the organism.
decode() - Method in class org.encog.neural.neat.training.NEATGenome
Convert the genes to an actual network.
decode() - Method in class org.encog.neural.networks.training.genetic.NeuralGenome
Decode the genomes into a neural network.
decodeFromArray(double[]) - Method in interface org.encog.ml.MLEncodable
Decode an array to this object.
decodeFromArray(double[]) - Method in class org.encog.neural.networks.BasicNetwork
Decode an array to this object.
decodeNetwork(double[]) - Method in class org.encog.neural.flat.FlatNetwork
Decode the specified data into the weights of the neural network.
decreaseTemperature(double) - Method in class org.encog.neural.thermal.BoltzmannMachine
Decrease the temperature by the specified amount.
deepCopy(Object) - Static method in class org.encog.util.obj.ObjectCloner
Perform a deep copy.
DEFAULT_ALTERNATE_CYCLES - Static variable in class org.encog.ml.train.strategy.HybridStrategy
The default number of cycles to use the alternate training for.
DEFAULT_BIAS_ACTIVATION - Static variable in class org.encog.neural.flat.FlatNetwork
The default bias activation.
DEFAULT_BUFFER_SIZE - Static variable in class org.encog.app.analyst.csv.shuffle.ShuffleCSV
The default buffer size.
DEFAULT_C - Static variable in class org.encog.ml.svm.SVM
The default C.
DEFAULT_CACHE_SIZE - Static variable in class org.encog.ml.svm.SVM
The default cache size.
DEFAULT_COEF0 - Static variable in class org.encog.ml.svm.SVM
The default COEF0.
DEFAULT_CONNECTION_LIMIT - Static variable in class org.encog.neural.networks.BasicNetwork
The default connection limit.
DEFAULT_CONST_BEGIN - Static variable in class org.encog.ml.svm.training.SVMSearchTrain
The default starting number for C.
DEFAULT_CONST_BEGIN - Static variable in class org.encog.ml.svm.training.SVMTrain
The default starting number for C.
DEFAULT_CONST_END - Static variable in class org.encog.ml.svm.training.SVMSearchTrain
The default ending number for C.
DEFAULT_CONST_END - Static variable in class org.encog.ml.svm.training.SVMTrain
The default ending number for C.
DEFAULT_CONST_STEP - Static variable in class org.encog.ml.svm.training.SVMSearchTrain
The default step for C.
DEFAULT_CONST_STEP - Static variable in class org.encog.ml.svm.training.SVMTrain
The default step for C.
DEFAULT_DEGREE - Static variable in class org.encog.ml.svm.SVM
The default degree.
DEFAULT_DOUBLE_EQUAL - Static variable in class org.encog.Encog
Default point at which two doubles are equal.
DEFAULT_EPS - Static variable in class org.encog.ml.svm.SVM
The default EPS.
DEFAULT_EVAL_PERCENT - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The default evaluation percent.
DEFAULT_GAMMA_BEGIN - Static variable in class org.encog.ml.svm.training.SVMSearchTrain
The default gamma begin.
DEFAULT_GAMMA_BEGIN - Static variable in class org.encog.ml.svm.training.SVMTrain
The default gamma begin.
DEFAULT_GAMMA_END - Static variable in class org.encog.ml.svm.training.SVMSearchTrain
The default gamma end.
DEFAULT_GAMMA_END - Static variable in class org.encog.ml.svm.training.SVMTrain
The default gamma end.
DEFAULT_GAMMA_STEP - Static variable in class org.encog.ml.svm.training.SVMSearchTrain
The default gamma step.
DEFAULT_GAMMA_STEP - Static variable in class org.encog.ml.svm.training.SVMTrain
The default gamma step.
DEFAULT_INC - Static variable in class org.encog.mathutil.LinearCongruentialGenerator
Default inc.
DEFAULT_INITIAL_UPDATE - Static variable in class org.encog.neural.flat.train.prop.RPROPConst
The starting update for a delta.
DEFAULT_ITERATIONS - Static variable in class org.encog.app.analyst.commands.CmdCluster
The default number of iterations.
DEFAULT_MAX_CLASS - Static variable in class org.encog.app.analyst.script.AnalystScript
The default MAX size for a class.
DEFAULT_MAX_ERROR - Static variable in class org.encog.neural.networks.training.pnn.TrainBasicPNN
The default max error.
DEFAULT_MAX_STEP - Static variable in class org.encog.neural.flat.train.prop.RPROPConst
The maximum amount a delta can reach.
DEFAULT_MIN_IMPROVEMENT - Static variable in class org.encog.ml.train.strategy.HybridStrategy
The default minimum improvement before we switch to the alternate training method.
DEFAULT_MIN_IMPROVEMENT - Static variable in class org.encog.ml.train.strategy.StopTrainingStrategy
The default minimum improvement before training stops.
DEFAULT_MIN_IMPROVEMENT - Static variable in class org.encog.neural.networks.training.pnn.TrainBasicPNN
The default minimum improvement before stop.
DEFAULT_MOD1 - Static variable in class org.encog.mathutil.LinearCongruentialGenerator
First part of default mod.
DEFAULT_MOD2 - Static variable in class org.encog.mathutil.LinearCongruentialGenerator
Second part of default mod.
DEFAULT_MULT - Static variable in class org.encog.mathutil.LinearCongruentialGenerator
Default mult.
DEFAULT_NU - Static variable in class org.encog.ml.svm.SVM
The default NU.
DEFAULT_NUM_SIGMAS - Static variable in class org.encog.neural.networks.training.pnn.TrainBasicPNN
The default number of sigmas to evaluate between the low and high.
DEFAULT_OLD_AGE_PENALTY - Static variable in class org.encog.ml.genetic.population.BasicPopulation
Thed default old age penalty.
DEFAULT_OLD_AGE_THRESHOLD - Static variable in class org.encog.ml.genetic.population.BasicPopulation
The default old age threshold.
DEFAULT_P - Static variable in class org.encog.ml.svm.SVM
The default P.
DEFAULT_PRECISION - Static variable in class org.encog.Encog
The default precision to use for compares.
DEFAULT_SIGMA_HIGH - Static variable in class org.encog.neural.networks.training.pnn.TrainBasicPNN
The default sigma high value.
DEFAULT_SIGMA_LOW - Static variable in class org.encog.neural.networks.training.pnn.TrainBasicPNN
THe default sigma low value.
DEFAULT_SURVIVAL_RATE - Static variable in class org.encog.ml.genetic.population.BasicPopulation
The default survival rate.
DEFAULT_TOLERATE_CYCLES - Static variable in class org.encog.ml.train.strategy.HybridStrategy
The default number of cycles to tolerate bad improvement for.
DEFAULT_TOLERATE_CYCLES - Static variable in class org.encog.ml.train.strategy.StopTrainingStrategy
The default number of cycles to tolerate.
DEFAULT_TRAIN_ERROR - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The default training error.
DEFAULT_TRAIN_PERCENT - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The default training percent.
DEFAULT_YOUTH_BONUS - Static variable in class org.encog.ml.genetic.population.BasicPopulation
The default youth penalty.
DEFAULT_YOUTH_THRESHOLD - Static variable in class org.encog.ml.genetic.population.BasicPopulation
The default youth threshold.
DEFAULT_ZERO_TOLERANCE - Static variable in class org.encog.neural.flat.train.prop.RPROPConst
The default zero tolerance.
deg2rad(double) - Static method in class org.encog.mathutil.EncogMath
Convert degrees to radians.
DEG_CIRCLE - Static variable in class org.encog.mathutil.MathConst
Degrees in a circle.
DEG_SEMICIRCLE - Static variable in class org.encog.mathutil.MathConst
Degrees in a semicircle.
degree - Variable in class org.encog.mathutil.libsvm.svm_parameter
 
deleteCol(Matrix, int) - Static method in class org.encog.mathutil.matrices.MatrixMath
Delete one column from the matrix.
deleteCol(int) - Method in class org.encog.ml.data.buffer.EncogEGBFile
Delete a column.
deleteDirectory(File) - Static method in class org.encog.util.file.Directory
Delete a directory and all children.
deleteRow(Matrix, int) - Static method in class org.encog.mathutil.matrices.MatrixMath
Delete a row from the matrix.
deleteRow(int) - Method in class org.encog.ml.data.buffer.EncogEGBFile
Delete a row.
DELTA_MIN - Static variable in class org.encog.neural.flat.train.prop.RPROPConst
The minimum delta value for a weight matrix value.
deNormalize(double) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Denormalize the specified value.
deNormalize(double) - Method in class org.encog.util.arrayutil.NormalizedField
Denormalize the specified value.
DEPTH - Static variable in class org.encog.persist.PersistConst
Depth.
derivativeFunction(double) - Method in class org.encog.engine.network.activation.ActivationBiPolar
Implements the activation function derivative.
derivativeFunction(double) - Method in class org.encog.engine.network.activation.ActivationCompetitive
Implements the activation function.
derivativeFunction(double) - Method in interface org.encog.engine.network.activation.ActivationFunction
Calculate the derivative of the activation.
derivativeFunction(double) - Method in class org.encog.engine.network.activation.ActivationGaussian
Calculate the derivative of the activation.
derivativeFunction(double) - Method in class org.encog.engine.network.activation.ActivationLinear
Calculate the derivative of the activation.
derivativeFunction(double) - Method in class org.encog.engine.network.activation.ActivationLOG
Calculate the derivative of the activation.
derivativeFunction(double) - Method in class org.encog.engine.network.activation.ActivationRamp
Calculate the derivative of the activation.
derivativeFunction(double) - Method in class org.encog.engine.network.activation.ActivationSigmoid
Calculate the derivative of the activation.
derivativeFunction(double) - Method in class org.encog.engine.network.activation.ActivationSIN
Calculate the derivative of the activation.
derivativeFunction(double) - Method in class org.encog.engine.network.activation.ActivationSoftMax
Calculate the derivative of the activation.
derivativeFunction(double) - Method in class org.encog.engine.network.activation.ActivationStep
Calculate the derivative of the activation.
derivativeFunction(double) - Method in class org.encog.engine.network.activation.ActivationTANH
Calculate the derivative of the activation.
DeriveMinimum - Class in org.encog.neural.networks.training.pnn
This class determines optimal values for multiple sigmas in a PNN kernel.
DeriveMinimum() - Constructor for class org.encog.neural.networks.training.pnn.DeriveMinimum
 
DESCRIPTION - Static variable in class org.encog.persist.PersistConst
A description.
det() - Method in class org.encog.mathutil.matrices.decomposition.LUDecomposition
Determinant
detectPerformers() - Method in class org.encog.neural.networks.training.concurrent.ConcurrentTrainingManager
Detect performers.
detectPerformers(boolean, int) - Method in class org.encog.neural.networks.training.concurrent.ConcurrentTrainingManager
Detect performers.
determineClass(double[]) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Determine what class the specified data belongs to.
determineClass(int, double[]) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Determine the class using part of an array.
determineClass(double[]) - Method in class org.encog.util.arrayutil.NormalizedField
Determine what class the specified data belongs to.
determineInputCount() - Method in class org.encog.app.analyst.EncogAnalyst
Determine the input count.
determineInputFieldCount() - Method in class org.encog.app.analyst.EncogAnalyst
Determine the input field count, the fields are higher-level than columns.
determineInputFormat(String) - Method in class org.encog.app.analyst.script.AnalystScript
Determine the input format for the specified file.
determineNeuronSignificance(int, int) - Method in class org.encog.neural.prune.PruneSelective
Determine the significance of the neuron.
determineOutputCount() - Method in class org.encog.app.analyst.EncogAnalyst
Determine the output count, this is the number of output columns needed.
determineOutputFieldCount() - Method in class org.encog.app.analyst.EncogAnalyst
Determine the number of output fields.
determineOutputFormat() - Method in class org.encog.app.analyst.script.AnalystScript
Determine the output format.
determineUniqueColumns() - Method in class org.encog.app.analyst.EncogAnalyst
Determine how many unique columns there are.
determineUniqueInputFieldCount() - Method in class org.encog.app.analyst.EncogAnalyst
Determine the unique input field count.
determineUniqueOutputFieldCount() - Method in class org.encog.app.analyst.EncogAnalyst
Determine the unique output field count.
DetermineWorkload - Class in org.encog.util.concurrency
Used by several Encog training methods to break up a workload.
DetermineWorkload(int, int) - Constructor for class org.encog.util.concurrency.DetermineWorkload
Determine the workload.
Directory - Class in org.encog.util.file
Directory utilities.
displayDate(Date) - Static method in class org.encog.util.csv.ReadCSV
Format a date.
Distort - Class in org.encog.mathutil.randomize
A randomizer that distorts what is already present in the neural network.
Distort(double) - Constructor for class org.encog.mathutil.randomize.Distort
Construct a distort randomizer for the specified factor.
Div - Class in org.encog.bot.browse.range
A document range that represents the beginning and ending DIV tag, as well as any tages embedded between them.
Div(WebPage) - Constructor for class org.encog.bot.browse.range.Div
Construct a range to hold the DIV tag.
divide(Matrix, double) - Static method in class org.encog.mathutil.matrices.MatrixMath
Return a matrix with each cell divided by the specified value.
DocumentRange - Class in org.encog.bot.browse.range
Base class that represents a document range.
DocumentRange(WebPage) - Constructor for class org.encog.bot.browse.range.DocumentRange
Construct a document range from the specified WebPage.
dotForm(String, String, String) - Static method in class org.encog.app.analyst.script.prop.PropertyEntry
Put a property in dot form, which is "section.subsection.name".
dotProduct(Matrix, Matrix) - Static method in class org.encog.mathutil.matrices.MatrixMath
Compute the dot product for the two matrixes.
double2bipolar(double) - Static method in class org.encog.mathutil.matrices.BiPolarUtil
Convert a bipolar value to a boolean.
double2bipolar(double[]) - Static method in class org.encog.mathutil.matrices.BiPolarUtil
Convert a bipolar array to booleans.
double2bipolar(double[][]) - Static method in class org.encog.mathutil.matrices.BiPolarUtil
Convert a bipolar array to a boolean array.
DOUBLE_SIZE - Static variable in class org.encog.ml.data.buffer.EncogEGBFile
The size of a double.
doubleEquals(double, double) - Static method in class org.encog.mathutil.EncogMath
Determine if one double equals another, within the default percision.
DoubleGene - Class in org.encog.ml.genetic.genes
A gene that contains a floating point value.
DoubleGene() - Constructor for class org.encog.ml.genetic.genes.DoubleGene
 
doubleToObject(double[]) - Static method in class org.encog.util.EngineArray
Convert an array of double primitives to Double objects.
download() - Method in class org.encog.app.analyst.EncogAnalyst
Download a raw file from the Internet.
downloadPage(URL, File) - Static method in class org.encog.bot.BotUtil
Load the specified URL to a file.
downsample(Downsample, boolean, int, int, double, double) - Method in class org.encog.ml.data.image.ImageNeuralData
Downsample, and copy, the image contents into the data of this object.
downsample(int, int) - Method in class org.encog.ml.data.image.ImageNeuralDataSet
Downsample all images and generate training data.
Downsample - Interface in org.encog.util.downsample
Utility to downsample an image.
downSample(Image, int, int) - Method in interface org.encog.util.downsample.Downsample
Downsample the image to the specified height and width.
downSample(Image, int, int) - Method in class org.encog.util.downsample.RGBDownsample
Called to downsample the image and store it in the down sample component.
downSample(Image, int, int) - Method in class org.encog.util.downsample.SimpleIntensityDownsample
Called to downsample the image and store it in the down sample component.
downSampleRegion(int, int) - Method in class org.encog.util.downsample.RGBDownsample
Called to downsample a region of the image.
dumpArray(double[]) - Static method in class org.encog.util.logging.DumpMatrix
Dump an array of numbers to a string.
dumpCounts() - Method in class org.encog.app.analyst.csv.balance.BalanceCSV
Return a string that lists the counts per class.
DumpMatrix - Class in org.encog.util.logging
A utility for writing matrixes to the log.
dumpMatrix(Matrix) - Static method in class org.encog.util.logging.DumpMatrix
Dump a matrix to a string.
dumpWeights() - Method in class org.encog.neural.networks.BasicNetwork
 

E

eatWhitespace() - Method in class org.encog.parse.tags.read.ReadTags
Remove any whitespace characters that are next in the InputStream.
eatWhiteSpace() - Method in class org.encog.util.SimpleParser
 
EG_FORMAT - Static variable in class org.encog.util.csv.CSVFormat
EG files, internally use a decimal point and comma separator.
EigenvalueDecomposition - Class in org.encog.mathutil.matrices.decomposition
Eigenvalues and eigenvectors of a real matrix.
EigenvalueDecomposition(Matrix) - Constructor for class org.encog.mathutil.matrices.decomposition.EigenvalueDecomposition
Check for symmetry, then construct the eigenvalue decomposition Structure to access D and V.
EIGHT_SPAN - Static variable in class org.encog.app.analyst.report.AnalystReport
Used as a col-span.
ElmanPattern - Class in org.encog.neural.pattern
This class is used to generate an Elman style recurrent neural network.
ElmanPattern() - Constructor for class org.encog.neural.pattern.ElmanPattern
Create an object to generate Elman neural networks.
enableConnection(int, int, int, boolean) - Method in class org.encog.neural.networks.BasicNetwork
Enable, or disable, a connection.
ENABLED - Static variable in class org.encog.persist.PersistConst
Enabled.
encode(int) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Encode the class.
encode(String) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Encode the string to numeric form.
encode(int) - Method in class org.encog.mathutil.Equilateral
Get the activations for the specified set.
encode() - Method in interface org.encog.ml.genetic.genome.Genome
Use the organism to update the genes.
encode(MLDataSet, int) - Static method in class org.encog.ml.svm.training.EncodeSVMProblem
Encode the Encog dataset.
encode() - Method in class org.encog.neural.neat.training.NEATGenome
Convert the network to genes.
encode() - Method in class org.encog.neural.networks.training.genetic.NeuralGenome
Encode the neural network into genes.
ENCODE - Static variable in class org.encog.util.http.FormUtility
The charset to use for URL encoding.
encodedArrayLength() - Method in interface org.encog.ml.MLEncodable
 
encodedArrayLength() - Method in class org.encog.neural.networks.BasicNetwork
encodeEquilateral(int) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Perform an equilateral encode.
encodeHeaders() - Method in class org.encog.util.arrayutil.NormalizedField
Encode the headers used by this field.
encodeNetwork() - Method in class org.encog.neural.flat.FlatNetwork
Encode the neural network to an array of doubles.
encodeSingleField(int) - Method in class org.encog.util.arrayutil.NormalizedField
Encode a single field.
EncodeSVMProblem - Class in org.encog.ml.svm.training
Encode an Encog dataset as a SVM problem.
encodeToArray(double[]) - Method in interface org.encog.ml.MLEncodable
Encode the object to the specified array.
encodeToArray(double[]) - Method in class org.encog.neural.networks.BasicNetwork
Encode the object to the specified array.
Encog - Class in org.encog
Main Encog class, does little more than provide version information.
ENCOG_FILE_VERSION - Static variable in class org.encog.Encog
The encog file version.
ENCOG_VERSION - Static variable in class org.encog.Encog
The version of the Encog JAR we are working with.
EncogAnalyst - Class in org.encog.app.analyst
The Encog Analyst runs Encog Analyst Script files (EGA) to perform many common machine learning tasks.
EncogAnalyst() - Constructor for class org.encog.app.analyst.EncogAnalyst
Construct the Encog analyst.
EncogBenchmark - Class in org.encog.util.benchmark
Benchmark Encog with several network types.
EncogBenchmark(StatusReportable) - Constructor for class org.encog.util.benchmark.EncogBenchmark
Construct a benchmark object.
EncogDirectoryPersistence - Class in org.encog.persist
Handles Encog persistence for a directory.
EncogDirectoryPersistence(File) - Constructor for class org.encog.persist.EncogDirectoryPersistence
Construct the object.
EncogEGBFile - Class in org.encog.ml.data.buffer
Used to access an Encog Binary Training file (*.EGB).
EncogEGBFile(File) - Constructor for class org.encog.ml.data.buffer.EncogEGBFile
Construct an EGB file.
EncogError - Exception in org.encog
General error class for Encog.
EncogError(String) - Constructor for exception org.encog.EncogError
Construct a message exception.
EncogError(Throwable) - Constructor for exception org.encog.EncogError
Construct an exception that holds another exception.
EncogError(String, Throwable) - Constructor for exception org.encog.EncogError
Construct an exception that holds another exception.
EncogFileSection - Class in org.encog.persist
This class is used internally to parse Encog files.
EncogFileSection(String, String) - Constructor for class org.encog.persist.EncogFileSection
Construct the object.
EncogFormatter - Class in org.encog.util.logging
A simple formatter for logging.
EncogFormatter() - Constructor for class org.encog.util.logging.EncogFormatter
 
EncogLogging - Class in org.encog.util.logging
 
EncogLogging() - Constructor for class org.encog.util.logging.EncogLogging
 
EncogMath - Class in org.encog.mathutil
Several useful math functions for Encog.
EncogMathError - Exception in org.encog.mathutil
Thrown when a math error happens.
EncogMathError(String) - Constructor for exception org.encog.mathutil.EncogMathError
Construct a message exception.
EncogMathError(String, Throwable) - Constructor for exception org.encog.mathutil.EncogMathError
Construct an exception that holds another exception.
EncogMathError(Throwable) - Constructor for exception org.encog.mathutil.EncogMathError
Construct an exception that holds another exception.
EncogPersistor - Interface in org.encog.persist
This interface defines an Encog Persistor.
EncogPluginBase - Interface in org.encog.plugin
 
EncogReadHelper - Class in org.encog.persist
Used to read an Encog EG/EGA file.
EncogReadHelper(InputStream) - Constructor for class org.encog.persist.EncogReadHelper
Construct the object.
EncogUtility - Class in org.encog.util.simple
General utility class for Encog.
EncogValidate - Class in org.encog.util
Used to validate if training is valid.
EncogWriteHelper - Class in org.encog.persist
Used to write an Encog EG/EGA file.
EncogWriteHelper(OutputStream) - Constructor for class org.encog.persist.EncogWriteHelper
Construct the object.
endBar() - Method in class org.encog.app.quant.ninja.NinjaStreamWriter
End the current bar.
endBody() - Method in class org.encog.util.HTMLReport
 
endDocument() - Method in class org.encog.parse.tags.write.WriteTags
End the document.
endHTML() - Method in class org.encog.util.HTMLReport
 
EndIterationsStrategy - Class in org.encog.ml.train.strategy.end
 
EndIterationsStrategy(int) - Constructor for class org.encog.ml.train.strategy.end.EndIterationsStrategy
 
endList() - Method in class org.encog.util.HTMLReport
 
endLoad() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
This method should be called once all the data has been loaded.
EndMaxErrorStrategy - Class in org.encog.ml.train.strategy.end
 
EndMaxErrorStrategy(double) - Constructor for class org.encog.ml.train.strategy.end.EndMaxErrorStrategy
 
EndMinutesStrategy - Class in org.encog.ml.train.strategy.end
 
EndMinutesStrategy(int) - Constructor for class org.encog.ml.train.strategy.end.EndMinutesStrategy
 
endPara() - Method in class org.encog.util.HTMLReport
 
endRow() - Method in class org.encog.util.HTMLReport
 
endTable() - Method in class org.encog.util.HTMLReport
 
endTableInCell() - Method in class org.encog.util.HTMLReport
 
endTag() - Method in class org.encog.parse.tags.write.WriteTags
End the current tag.
endTag(String) - Method in class org.encog.parse.tags.write.WriteTags
End a tag, require that we are ending the specified tag.
EndTrainingStrategy - Interface in org.encog.ml.train.strategy.end
 
enforceLimit() - Method in class org.encog.neural.networks.structure.NeuralStructure
Enforce that all connections are above the connection limit.
EngineArray - Class in org.encog.util
Some array functions used by Encog.
EngineConcurrency - Class in org.encog.util.concurrency
This class abstracts thread pools, and potentially grids and other types of concurrency.
EngineConcurrency() - Constructor for class org.encog.util.concurrency.EngineConcurrency
Construct a concurrency object.
EngineTask - Interface in org.encog.util.concurrency
An individual task that can be submitted to the EncogCurrency utility.
ENGLISH - Static variable in class org.encog.util.csv.CSVFormat
Decimal point is typically used in English speaking counties.
EnglishTimeUnitNames - Class in org.encog.util.time
Class used to get the English names for TimeUnits.
EnglishTimeUnitNames() - Constructor for class org.encog.util.time.EnglishTimeUnitNames
 
eol() - Method in class org.encog.util.SimpleParser
 
eps - Variable in class org.encog.mathutil.libsvm.svm_parameter
 
EPSILON_SVR - Static variable in class org.encog.mathutil.libsvm.svm_parameter
 
equals(Matrix, int) - Method in class org.encog.mathutil.matrices.Matrix
Compare to matrixes with the specified level of precision.
equals(Object) - Method in class org.encog.mathutil.matrices.Matrix
Check to see if this matrix equals another, using default precision.
equals(Object) - Method in class org.encog.ml.genetic.genes.IntegerGene
equals(BasicNetwork) - Method in class org.encog.neural.networks.BasicNetwork
Compare the two neural networks.
equals(BasicNetwork, int) - Method in class org.encog.neural.networks.BasicNetwork
Determine if this neural network is equal to another.
equals(BasicNetwork, BasicNetwork) - Static method in class org.encog.neural.networks.structure.NetworkCODEC
Determine if the two neural networks are equal.
equals(BasicNetwork, BasicNetwork, int) - Static method in class org.encog.neural.networks.structure.NetworkCODEC
Determine if the two neural networks are equal.
Equilateral - Class in org.encog.mathutil
Used to produce an array of activations to classify data into groups.
Equilateral(int, double, double) - Constructor for class org.encog.mathutil.Equilateral
Construct an equilateral matrix.
ERROR - Static variable in class org.encog.persist.PersistConst
Error.
ERROR_ADD - Static variable in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Error message for ADD.
ERROR_REMOVE - Static variable in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Error message for REMOVE.
ErrorCalculation - Class in org.encog.mathutil.error
Calculate the error of a neural network.
ErrorCalculation() - Constructor for class org.encog.mathutil.error.ErrorCalculation
 
ErrorCalculationMode - Enum in org.encog.mathutil.error
Selects the error calculation mode for Encog.
establishEquilibrium() - Method in class org.encog.neural.thermal.BoltzmannMachine
Run the network until thermal equilibrium is established.
EULERS_NUMBER - Static variable in class org.encog.mathutil.MathConst
Euler's number.
Evaluate - Class in org.encog.util.benchmark
Used to evaluate the training time for a network.
Evaluate() - Constructor for class org.encog.util.benchmark.Evaluate
 
evaluate(MLRegression, MLDataSet) - Static method in class org.encog.util.simple.EncogUtility
Evaluate the network and display (to the console) the output for every value in the training set.
evaluateTrain(int, int, int, int) - Static method in class org.encog.util.benchmark.Evaluate
 
evaluateTrain(BasicNetwork, MLDataSet) - Static method in class org.encog.util.benchmark.Evaluate
Evaluate how long it takes to calculate the error for the network.
ExcelCODEC - Class in org.encog.ml.data.buffer.codec
A CODEC that can read/write Microsoft Excel (*.XLSX) files.
ExcelCODEC(File) - Constructor for class org.encog.ml.data.buffer.codec.ExcelCODEC
Constructor to create Excel from binary.
ExcelCODEC(File, int, int) - Constructor for class org.encog.ml.data.buffer.codec.ExcelCODEC
Create a CODEC to load data from Excel to binary.
exclude(int, String) - Method in class org.encog.app.analyst.csv.filter.FilterCSV
Exclude rows where the specified field has the specified value.
ExcludedField - Class in org.encog.app.analyst.csv.filter
Used internally to track excluded fields from the FilterCSV.
ExcludedField(int, String) - Constructor for class org.encog.app.analyst.csv.filter.ExcludedField
Construct the object.
execute(String, Object[]) - Method in interface org.encog.plugin.EncogPluginBase
 
executeCommand(String) - Method in class org.encog.app.analyst.commands.Cmd
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdBalance
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdCluster
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdCreate
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdEvaluate
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdEvaluateRaw
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdGenerate
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdNormalize
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdRandomize
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdReset
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdSegregate
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdSet
Execute this command.
executeCommand(String) - Method in class org.encog.app.analyst.commands.CmdTrain
Execute this command.
executeTask(AnalystTask) - Method in class org.encog.app.analyst.EncogAnalyst
Execute a task.
executeTask(String) - Method in class org.encog.app.analyst.EncogAnalyst
Execute a task.
exp(double) - Static method in class org.encog.mathutil.BoundMath
Calculate the exp.
expectInputHeaders(String) - Method in class org.encog.app.analyst.script.AnalystScript
Determine if input headers are expected.
external2Binary(File) - Method in class org.encog.ml.data.buffer.BinaryDataLoader
Convert an external file format, such as CSV, to the Encog binary training format.
external2Memory() - Method in class org.encog.ml.data.buffer.MemoryDataLoader
Convert an external file format, such as CSV, to an Encog memory training set.
extract(String, String, String, int) - Static method in class org.encog.bot.BotUtil
This method is very useful for grabbing information from a HTML page.
extractFields(EncogAnalyst, CSVHeaders, ReadCSV, int, boolean) - Static method in class org.encog.app.analyst.csv.normalize.AnalystNormalizeCSV
Extract fields from a file into a numeric array for machine learning.
extractFromIndex(String, String, String, int, int) - Static method in class org.encog.bot.BotUtil
This method is very useful for grabbing information from a HTML page.

F

FanInRandomizer - Class in org.encog.mathutil.randomize
A randomizer that attempts to create starting weight values that are conducive to propagation training.
FanInRandomizer() - Constructor for class org.encog.mathutil.randomize.FanInRandomizer
Create a fan-in randomizer with default values.
FanInRandomizer(double, boolean) - Constructor for class org.encog.mathutil.randomize.FanInRandomizer
Construct a fan-in randomizer along the specified boundary.
FanInRandomizer(double, double, boolean) - Constructor for class org.encog.mathutil.randomize.FanInRandomizer
Construct a fan-in randomizer.
FeedforwardFactory - Class in org.encog.ml.factory.method
A factor to create feedforward networks.
FeedforwardFactory() - Constructor for class org.encog.ml.factory.method.FeedforwardFactory
 
FeedForwardPattern - Class in org.encog.neural.pattern
Used to create feedforward neural networks.
FeedForwardPattern() - Constructor for class org.encog.neural.pattern.FeedForwardPattern
 
FILE_BALANCE - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The balanced file.
FILE_CLUSTER - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The clustered file.
FILE_EVAL - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The evaluation file.
FILE_EVAL_NORM - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The eval file normalization file.
FILE_ML - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The machine learning file.
FILE_NORMALIZE - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The normalized file.
FILE_OUTPUT - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The output file.
FILE_RANDOM - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The randomized file.
FILE_RAW - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The raw file.
FILE_TRAIN - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The training file.
FILE_TRAINSET - Static variable in class org.encog.app.analyst.wizard.AnalystWizard
The training set.
FileData - Class in org.encog.app.analyst.csv.basic
A column that is based off of a column in a CSV file.
FileData(String, int, boolean, boolean) - Constructor for class org.encog.app.analyst.csv.basic.FileData
Construct the object.
FileUtil - Class in org.encog.util.file
 
FileUtil() - Constructor for class org.encog.util.file.FileUtil
 
fill(double[], double) - Static method in class org.encog.util.EngineArray
Fill a double array.
fill(float[], float) - Static method in class org.encog.util.EngineArray
Fill a float array.
FilterCSV - Class in org.encog.app.analyst.csv.filter
This class can be used to remove certain rows from a CSV.
FilterCSV() - Constructor for class org.encog.app.analyst.csv.filter.FilterCSV
 
finalizeField() - Method in class org.encog.app.analyst.analyze.AnalyzedField
Finalize the field, and create a DataField.
finalizeStructure() - Method in class org.encog.neural.networks.structure.NeuralStructure
Build the synapse and layer structure.
find(String) - Method in class org.encog.app.analyst.util.CSVHeaders
Find the specified column.
find(Class<?>, int) - Method in class org.encog.bot.browse.WebPage
Find the specified DocumentRange subclass in the contents list.
findBestRange(double, double, int, boolean, double, CalculationCriteria) - Method in class org.encog.neural.networks.training.pnn.GlobalMinimumSearch
Find the best common gamma.
findBounds() - Method in interface org.encog.util.downsample.Downsample
Find the bounds around the image to exclude whitespace.
findBounds() - Method in class org.encog.util.downsample.RGBDownsample
This method is called to automatically crop the image so that whitespace is removed.
findDataField(String) - Method in class org.encog.app.analyst.script.AnalystScript
Find the specified data field.
findDataFieldIndex(DataField) - Method in class org.encog.app.analyst.script.AnalystScript
Find the specified data field and return its index.
findEndTag(int, Tag) - Method in class org.encog.bot.browse.LoadWebPage
Find the end tag that lines up to the beginning tag.
findEntry(String) - Method in class org.encog.app.analyst.script.prop.PropertyConstraints
Find an entry based on a string.
findField(Class<?>, String) - Static method in class org.encog.util.obj.ReflectionUtil
Find the specified field, look also in superclasses.
findLink(String) - Method in class org.encog.bot.browse.WebPage
Find the link that contains the specified string.
findNormalizedField(String, int) - Method in class org.encog.app.analyst.script.AnalystScript
Find the specified normalized field.
findOccurance(String, String, int) - Static method in class org.encog.bot.BotUtil
Find the specified occurrence of one string in another string.
findStringInArray(String[], String) - Static method in class org.encog.util.EngineArray
Search for a string in an array.
findTag(String, boolean) - Method in class org.encog.parse.tags.read.ReadXML
Advance until the specified tag is found.
findType(String, int) - Method in class org.encog.bot.browse.range.Form
Find the form input by type.
finishTraining() - Method in class org.encog.ml.svm.training.SVMSearchTrain
Should be called after training has completed and the iteration method will not be called any further.
finishTraining() - Method in class org.encog.ml.train.BasicTraining
Should be called after training has completed and the iteration method will not be called any further.
finishTraining() - Method in interface org.encog.ml.train.MLTrain
Should be called once training is complete and no more iterations are needed.
finishTraining() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
Training is to stop, free any resources.
finishTraining() - Method in interface org.encog.neural.flat.train.TrainFlatNetwork
Training is to stop, free any resources.
finishTraining() - Method in class org.encog.neural.neat.training.NEATTraining
Called when training is done.
finishTraining() - Method in class org.encog.neural.networks.training.propagation.Propagation
Should be called after training has completed and the iteration method will not be called any further.
FIRST_LAMBDA - Static variable in class org.encog.neural.flat.train.prop.TrainFlatNetworkSCG
The starting value for lambda.
FIRST_SIGMA - Static variable in class org.encog.neural.flat.train.prop.TrainFlatNetworkSCG
The starting value for sigma.
FIVE - Static variable in class org.encog.mathutil.NumericRange
Display to five decimal places.
FIVE_SPAN - Static variable in class org.encog.app.analyst.report.AnalystReport
Used as a col-span.
fixSingleValue() - Method in class org.encog.app.analyst.script.normalize.AnalystField
Fix normalized fields that have a single value for the min/max.
fixSingleValue() - Method in class org.encog.util.arrayutil.NormalizedField
Fix normalized fields that have a single value for the min/max.
FlatGradientWorker - Interface in org.encog.neural.flat.train.gradient
An interface used to define gradient workers for flat networks.
FlatLayer - Class in org.encog.neural.flat
Used to configure a flat layer.
FlatLayer(ActivationFunction, int, double) - Constructor for class org.encog.neural.flat.FlatLayer
Construct a flat layer.
FlatNetwork - Class in org.encog.neural.flat
Implements a flat (vector based) neural network in the Encog Engine.
FlatNetwork() - Constructor for class org.encog.neural.flat.FlatNetwork
Default constructor.
FlatNetwork(FlatLayer[]) - Constructor for class org.encog.neural.flat.FlatNetwork
Create a flat network from an array of layers.
FlatNetwork(int, int, int, int, boolean) - Constructor for class org.encog.neural.flat.FlatNetwork
Construct a flat neural network.
FlatNetworkRBF - Class in org.encog.neural.flat
A flat network designed to handle an RBF.
FlatNetworkRBF() - Constructor for class org.encog.neural.flat.FlatNetworkRBF
Default constructor.
FlatNetworkRBF(int, int, int, RadialBasisFunction[]) - Constructor for class org.encog.neural.flat.FlatNetworkRBF
Construct an RBF flat network.
flatToMatrix(double[], int, double[][]) - Method in class org.encog.neural.rbf.training.SVDTraining
 
flush() - Method in class org.encog.persist.EncogWriteHelper
Flush the file.
fold(int) - Method in class org.encog.ml.data.folded.FoldedDataSet
Fold the dataset.
FoldedDataSet - Class in org.encog.ml.data.folded
A folded data set allows you to "fold" the data into several equal(or nearly equal) datasets.
FoldedDataSet(MLDataSet) - Constructor for class org.encog.ml.data.folded.FoldedDataSet
Create a folded dataset.
FoldedIterator - Class in org.encog.ml.data.folded
Used to iterate over a folded data set.
FoldedIterator(FoldedDataSet) - Constructor for class org.encog.ml.data.folded.FoldedIterator
Construct the folded iterator.
forceExtension(String, String) - Static method in class org.encog.util.file.FileUtil
 
Form - Class in org.encog.bot.browse.range
A document range that represents a form, and all embedded tags.
Form(WebPage) - Constructor for class org.encog.bot.browse.range.Form
Construct a form on the specified web page.
Form.Method - Enum in org.encog.bot.browse.range
The method for this form.
format(double, int) - Method in class org.encog.util.csv.CSVFormat
Format the specified number to a string with the specified number of fractional digits.
Format - Class in org.encog.util
Provides the ability for Encog to format numbers and times.
format(LogRecord) - Method in class org.encog.util.logging.EncogFormatter
Format the log record.
formatDouble(double, int) - Static method in class org.encog.util.Format
Format a double.
formatInteger(int) - Static method in class org.encog.util.Format
Format an integer.
formatMemory(long) - Static method in class org.encog.util.Format
Format a memory amount, to something like 32 MB.
formatNeuralData(MLData) - Static method in class org.encog.util.simple.EncogUtility
Format neural data as a list of numbers.
formatPercent(double) - Static method in class org.encog.util.Format
Format a percent.
formatPercentWhole(double) - Static method in class org.encog.util.Format
Format a percent with no decimal places.
formatTimeSpan(int) - Static method in class org.encog.util.Format
Format a time span as seconds, minutes, hours and days.
formatYesNo(boolean) - Static method in class org.encog.util.Format
Format a boolean as yes/no.
FormElement - Class in org.encog.bot.browse.range
A document range that represents one individual component to a form.
FormElement(WebPage) - Constructor for class org.encog.bot.browse.range.FormElement
Construct a form element from the specified web page.
FormUtility - Class in org.encog.util.http
This class is used to construct responses to HTML forms.
FormUtility(OutputStream, String) - Constructor for class org.encog.util.http.FormUtility
Prepare to access either a regular, or multipart, form.
fromList(CSVFormat, String) - Static method in class org.encog.util.csv.NumberList
Get an array of double's from a string of comma separated text.
fromListInt(CSVFormat, String) - Static method in class org.encog.util.csv.NumberList
 
fromPackedArray(Double[], int) - Method in class org.encog.mathutil.matrices.Matrix
Create a matrix from a packed array.
function(int, int) - Method in class org.encog.neural.som.training.basic.neighborhood.NeighborhoodBubble
Determine how much the current neuron should be affected by training based on its proximity to the winning neuron.
function(int, int) - Method in interface org.encog.neural.som.training.basic.neighborhood.NeighborhoodFunction
Determine how much the current neuron should be affected by training based on its proximity to the winning neuron.
function(int, int) - Method in class org.encog.neural.som.training.basic.neighborhood.NeighborhoodRBF
Calculate the value for the multi RBF function.
function(int, int) - Method in class org.encog.neural.som.training.basic.neighborhood.NeighborhoodRBF1D
Determine how much the current neuron should be affected by training based on its proximity to the winning neuron.
function(int, int) - Method in class org.encog.neural.som.training.basic.neighborhood.NeighborhoodSingle
Determine how much the current neuron should be affected by training based on its proximity to the winning neuron.

G

gamma - Variable in class org.encog.mathutil.libsvm.svm_parameter
 
GaussianFunction - Class in org.encog.mathutil.rbf
Multi-dimensional gaussian function.
GaussianFunction() - Constructor for class org.encog.mathutil.rbf.GaussianFunction
Default constructor, used for reflection.
GaussianFunction(double, double, double) - Constructor for class org.encog.mathutil.rbf.GaussianFunction
Construct a single-dimension Gaussian function with the specified peak, centers and widths.
GaussianFunction(double, double[], double) - Constructor for class org.encog.mathutil.rbf.GaussianFunction
Construct a multi-dimension Gaussian function with the specified peak, centers and widths.
GaussianFunction(int) - Constructor for class org.encog.mathutil.rbf.GaussianFunction
Create centered at zero, width 0, and peak 0.
GaussianRandomizer - Class in org.encog.mathutil.randomize
Generally, you will not want to use this randomizer as a pure neural network randomizer.
GaussianRandomizer(double, double) - Constructor for class org.encog.mathutil.randomize.GaussianRandomizer
Construct a Gaussian randomizer.
Gene - Interface in org.encog.ml.genetic.genes
Describes a gene.
generate() - Method in class org.encog.neural.pattern.ADALINEPattern
Generate the network.
generate() - Method in class org.encog.neural.pattern.ART1Pattern
Generate the neural network.
generate() - Method in class org.encog.neural.pattern.BAMPattern
 
generate() - Method in class org.encog.neural.pattern.BoltzmannPattern
Generate the network.
generate() - Method in class org.encog.neural.pattern.CPNPattern
Generate the network.
generate() - Method in class org.encog.neural.pattern.ElmanPattern
Generate the Elman neural network.
generate() - Method in class org.encog.neural.pattern.FeedForwardPattern
Generate the feedforward neural network.
generate() - Method in class org.encog.neural.pattern.HopfieldPattern
Generate the Hopfield neural network.
generate() - Method in class org.encog.neural.pattern.JordanPattern
Generate a Jordan neural network.
generate() - Method in interface org.encog.neural.pattern.NeuralNetworkPattern
Generate the specified neural network.
generate() - Method in class org.encog.neural.pattern.PNNPattern
Generate the RSOM network.
generate() - Method in class org.encog.neural.pattern.RadialBasisPattern
Generate the RBF network.
generate() - Method in class org.encog.neural.pattern.SOMPattern
Generate the RSOM network.
generate() - Method in class org.encog.neural.pattern.SVMPattern
 
generate(long, int, int, int, double, double) - Static method in class org.encog.util.benchmark.RandomTrainingFactory
Generate a random training set.
generate(MLDataSet, long, int, double, double) - Static method in class org.encog.util.benchmark.RandomTrainingFactory
Generate random training into a training set.
generate() - Method in class org.encog.util.identity.BasicGenerateID
Generate the next ID.
generate() - Method in interface org.encog.util.identity.GenerateID
Generate the next ID.
GENERATE_CONFIG_SOURCE_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "GENERATE:CONFIG_sourceFile".
GENERATE_CONFIG_TARGET_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "GENERATE:CONFIG_targetFile".
GenerateID - Interface in org.encog.util.identity
Interface that defines a unique ID generator.
GeneticAlgorithm - Class in org.encog.ml.genetic
Implements a genetic algorithm.
GeneticAlgorithm() - Constructor for class org.encog.ml.genetic.GeneticAlgorithm
 
GeneticError - Exception in org.encog.ml.genetic
An error raised by the genetic algorithm.
GeneticError(String) - Constructor for exception org.encog.ml.genetic.GeneticError
Construct a message exception.
GeneticError(String, Throwable) - Constructor for exception org.encog.ml.genetic.GeneticError
Construct an exception that holds another exception.
GeneticError(Throwable) - Constructor for exception org.encog.ml.genetic.GeneticError
Construct an exception that holds another exception.
GeneticFactory - Class in org.encog.ml.factory.train
A factory to create genetic algorithm trainers.
GeneticFactory() - Constructor for class org.encog.ml.factory.train.GeneticFactory
 
GeneticScoreAdapter - Class in org.encog.neural.networks.training.genetic
This adapter allows a CalculateScore object to be used to calculate a Genome's score, where a CalculateGenomeScore object would be called for.
GeneticScoreAdapter(CalculateScore) - Constructor for class org.encog.neural.networks.training.genetic.GeneticScoreAdapter
Construct the adapter.
Genome - Interface in org.encog.ml.genetic.genome
A genome is the basic blueprint for creating an organism in Encog.
GenomeComparator - Class in org.encog.ml.genetic.genome
Used to compare two genomes, a score object is used.
GenomeComparator(CalculateGenomeScore) - Constructor for class org.encog.ml.genetic.genome.GenomeComparator
Construct the genome comparator.
get(int, int) - Method in class org.encog.mathutil.matrices.Matrix
Read the specified cell in the matrix.
get(int) - Method in class org.encog.ml.genetic.genome.Chromosome
Get an individual gene.
get(int) - Method in class org.encog.ml.genetic.innovation.BasicInnovationList
Get a specific innovation, by index.
get(int) - Method in interface org.encog.ml.genetic.innovation.InnovationList
Get the innovation specified by index.
get(int) - Method in class org.encog.ml.genetic.population.BasicPopulation
Get a genome by index.
get(int) - Method in interface org.encog.ml.genetic.population.Population
Get a genome by index.
get(int) - Method in class org.encog.ml.kmeans.KMeansCluster
Get the specified data item by index.
get(int) - Method in interface org.encog.ml.MLCluster
Get the specified data item by index.
get(String) - Method in class org.encog.neural.networks.training.propagation.TrainingContinuation
Get an object by name.
get(int) - Method in class org.encog.util.csv.ReadCSV
Get the specified column as a string.
get(String) - Method in class org.encog.util.csv.ReadCSV
Get the column by its string name, as a string.
getA() - Method in class org.encog.util.ObjectPair
 
getA1() - Method in class org.encog.neural.art.ART1
 
getA1() - Method in class org.encog.neural.pattern.ART1Pattern
 
getAction() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
getAction() - Method in class org.encog.bot.browse.range.Form
 
getAction() - Method in class org.encog.util.arrayutil.NormalizedField
 
getAction() - Method in class org.encog.util.arrayutil.TemporalWindowField
 
getActivation() - Method in class org.encog.neural.flat.FlatLayer
 
getActivation(int) - Method in class org.encog.neural.networks.BasicNetwork
Get the activation function for the specified layer.
getActivationFunction() - Method in class org.encog.neural.neat.NEATNetwork
 
getActivationFunction() - Method in class org.encog.neural.networks.layers.BasicLayer
 
getActivationFunction() - Method in interface org.encog.neural.networks.layers.Layer
 
getActivationFunctions() - Method in class org.encog.neural.flat.FlatNetwork
 
getActivationOutput() - Method in class org.encog.neural.pattern.FeedForwardPattern
 
getActivationResponse() - Method in class org.encog.neural.neat.NEATNeuron
 
getActivationResponse() - Method in class org.encog.neural.neat.training.NEATNeuronGene
 
getActualHigh() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
getActualHigh() - Method in class org.encog.util.arrayutil.NormalizedField
 
getActualLow() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
getActualLow() - Method in class org.encog.util.arrayutil.NormalizedField
 
getAdjustedScore() - Method in class org.encog.ml.genetic.genome.BasicGenome
 
getAdjustedScore() - Method in interface org.encog.ml.genetic.genome.Genome
Get the adjusted score, this considers old-age penalties and youth bonuses.
getAge() - Method in class org.encog.ml.genetic.species.BasicSpecies
 
getAge() - Method in interface org.encog.ml.genetic.species.Species
 
getAllFields(Class<?>) - Static method in class org.encog.util.obj.ReflectionUtil
Get all of the fields from the specified class as a collection.
getAllFields(Class<?>, Collection<Field>) - Static method in class org.encog.util.obj.ReflectionUtil
Get all of the fields in the specified class and super classes.
getAllValues() - Method in class org.encog.neural.networks.structure.AnalyzeNetwork
 
getAmountToSpawn() - Method in class org.encog.ml.genetic.genome.BasicGenome
 
getAmountToSpawn() - Method in interface org.encog.ml.genetic.genome.Genome
 
getAnalyst() - Method in class org.encog.app.analyst.commands.Cmd
 
getAnalyst() - Method in class org.encog.app.analyst.csv.TimeSeriesUtil
 
getAnalyzedClassMembers() - Method in class org.encog.app.analyst.analyze.AnalyzedField
Get the class members.
getAnnealCycles() - Method in class org.encog.neural.pattern.BoltzmannPattern
 
getAnnealCycles() - Method in class org.encog.neural.thermal.BoltzmannMachine
 
getArray() - Method in class org.encog.ml.anneal.SimulatedAnnealing
Subclasses must provide access to an array that makes up the solution.
getArray() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealing
Get the network as an array of doubles.
getArray() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealingHelper
Used to pass the getArray call on to the parent object.
getArrayCopy() - Method in class org.encog.mathutil.matrices.Matrix
 
getArrayCopy() - Method in class org.encog.ml.anneal.SimulatedAnnealing
Get a copy of the array.
getArrayCopy() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealing
 
getArrayCopy() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealingHelper
Used to pass the getArrayCopy call on to the parent object.
getAttributeInt(String) - Method in class org.encog.parse.tags.Tag
Get the specified attribute as an integer.
getAttributes() - Method in class org.encog.bot.rss.RSS
Get the list of attributes.
getAttributes() - Method in class org.encog.parse.tags.Tag
Get a map of all attributes.
getAttributeValue(String) - Method in class org.encog.parse.tags.Tag
Get the value of the specified attribute.
getB() - Method in class org.encog.util.ObjectPair
 
getB1() - Method in class org.encog.neural.art.ART1
 
getB1() - Method in class org.encog.neural.pattern.ART1Pattern
 
getBaseHeader(int) - Method in class org.encog.app.analyst.util.CSVHeaders
Get the base header, strip any (...).
getBasePath() - Method in class org.encog.app.analyst.script.AnalystScript
 
getBegin() - Method in class org.encog.bot.browse.range.DocumentRange
 
getBeginningIndex() - Method in class org.encog.app.quant.indicators.Indicator
 
getBeginTraining() - Method in class org.encog.neural.flat.FlatNetwork
 
getBest() - Method in class org.encog.ml.genetic.population.BasicPopulation
getBest() - Method in interface org.encog.ml.genetic.population.Population
 
getBestNetwork() - Method in class org.encog.neural.prune.PruneIncremental
 
getBestScore() - Method in class org.encog.ml.genetic.species.BasicSpecies
 
getBestScore() - Method in interface org.encog.ml.genetic.species.Species
 
getBias() - Method in class org.encog.neural.networks.structure.AnalyzeNetwork
 
getBiasActivation() - Method in class org.encog.neural.flat.FlatLayer
 
getBiasActivation() - Method in class org.encog.neural.flat.FlatNetwork
 
getBiasActivation() - Method in interface org.encog.neural.networks.layers.Layer
Most layer types will default this value to one.
getBiasValues() - Method in class org.encog.neural.networks.structure.AnalyzeNetwork
 
getBinaryScore() - Method in class org.encog.util.benchmark.EncogBenchmark
 
getBoolean(int) - Method in class org.encog.ml.data.specific.BiPolarNeuralData
Get the specified data item as a boolean.
getBoolean(String, boolean, boolean) - Method in class org.encog.util.ParamsHolder
Get a param as a boolean.
getBoundary() - Static method in class org.encog.util.http.FormUtility
Generate a boundary for a multipart form.
getBuffer() - Method in class org.encog.app.analyst.csv.TimeSeriesUtil
 
getBufferSize() - Method in class org.encog.app.analyst.csv.shuffle.ShuffleCSV
 
getC() - Method in class org.encog.ml.svm.training.SVMTrain
 
getC1() - Method in class org.encog.neural.art.ART1
 
getC1() - Method in class org.encog.neural.pattern.ART1Pattern
 
getCalculateScore() - Method in class org.encog.ml.genetic.GeneticAlgorithm
 
getCalculateScore() - Method in class org.encog.ml.genetic.genome.GenomeComparator
 
getCalculateScore() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealing
 
getCenter() - Method in class org.encog.engine.network.activation.ActivationGaussian
 
getCenter() - Method in class org.encog.engine.network.activation.ActivationStep
 
getCenter(int) - Method in class org.encog.mathutil.rbf.BasicRBF
Get the center of this RBD.
getCenter(int) - Method in interface org.encog.mathutil.rbf.RadialBasisFunction
Get the center of this RBD.
getCenters() - Method in class org.encog.mathutil.rbf.BasicRBF
getCenters() - Method in interface org.encog.mathutil.rbf.RadialBasisFunction
 
getCenters() - Method in class org.encog.ml.kmeans.Centroid
 
getCentroid() - Method in class org.encog.ml.kmeans.KMeansCluster
 
getChromosomes() - Method in class org.encog.ml.genetic.genome.BasicGenome
 
getChromosomes() - Method in interface org.encog.ml.genetic.genome.Genome
 
getClassAttribute() - Method in class org.encog.bot.browse.range.DocumentRange
 
getClasses() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
getClasses() - Method in class org.encog.util.arrayutil.NormalizedField
 
getClassMembers() - Method in class org.encog.app.analyst.script.DataField
 
getClScore() - Method in class org.encog.util.benchmark.EncogBenchmark
 
getCluster() - Method in class org.encog.ml.kmeans.Centroid
 
getClusters() - Method in class org.encog.ml.kmeans.KMeansClustering
 
getClusters() - Method in interface org.encog.ml.MLClustering
 
getCode() - Method in class org.encog.app.analyst.script.AnalystClassItem
 
getCode() - Method in class org.encog.bot.dataunit.CodeDataUnit
 
getCodec() - Method in class org.encog.ml.data.buffer.BinaryDataLoader
 
getCodec() - Method in class org.encog.ml.data.buffer.MemoryDataLoader
 
getCol(int) - Method in class org.encog.mathutil.matrices.Matrix
Read one entire column from the matrix as a sub-matrix.
getCols() - Method in class org.encog.mathutil.matrices.Matrix
Get the columns in the matrix.
getColumnCount() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
getColumnCount() - Method in class org.encog.util.csv.ReadCSV
Get the column count.
getColumnData(String, ReadCSV) - Method in class org.encog.app.analyst.csv.basic.BasicCachedFile
Get the data for a specific column.
getColumnMapping() - Method in class org.encog.app.analyst.csv.basic.BasicCachedFile
 
getColumnNames() - Method in class org.encog.util.csv.ReadCSV
 
getColumns() - Method in class org.encog.app.analyst.csv.basic.BasicCachedFile
 
getColumnsNeeded() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
getColumnsNeeded() - Method in class org.encog.util.arrayutil.NormalizedField
 
getComparator() - Method in class org.encog.ml.genetic.GeneticAlgorithm
 
getCompatibilityScore(NEATGenome) - Method in class org.encog.neural.neat.training.NEATGenome
Get the compatibility score with another genome.
getConnectionLimit() - Method in class org.encog.neural.flat.FlatNetwork
 
getConnectionLimit() - Method in class org.encog.neural.networks.structure.NeuralStructure
 
getConsoleHandler() - Static method in class org.encog.util.logging.Logging
 
getConstBegin() - Method in class org.encog.ml.svm.training.SVMSearchTrain
 
getConstEnd() - Method in class org.encog.ml.svm.training.SVMSearchTrain
 
getConstStep() - Method in class org.encog.ml.svm.training.SVMSearchTrain
 
getContents() - Method in class org.encog.bot.browse.WebPage
 
getContents() - Method in class org.encog.neural.networks.training.propagation.TrainingContinuation
 
getContextCount() - Method in class org.encog.neural.flat.FlatLayer
 
getContextFedBy() - Method in class org.encog.neural.flat.FlatLayer
 
getContextTargetOffset() - Method in class org.encog.neural.flat.FlatNetwork
 
getContextTargetSize() - Method in class org.encog.neural.flat.FlatNetwork
 
getCount() - Method in class org.encog.app.analyst.script.AnalystClassItem
 
getCount() - Method in class org.encog.ml.factory.parse.ArchitectureLayer
 
getCount() - Method in class org.encog.neural.flat.FlatLayer
 
getCountPer() - Method in class org.encog.neural.pnn.BasicPNN
 
getCounts() - Method in class org.encog.app.analyst.csv.balance.BalanceCSV
 
getCpuScore() - Method in class org.encog.util.benchmark.EncogBenchmark
 
getCrossover() - Method in class org.encog.ml.genetic.GeneticAlgorithm
 
getCurrentBlue() - Method in class org.encog.util.downsample.RGBDownsample
 
getCurrentFlatNetwork() - Method in class org.encog.neural.networks.training.propagation.Propagation
 
getCurrentFold() - Method in class org.encog.ml.data.folded.FoldedDataSet
 
getCurrentFoldOffset() - Method in class org.encog.ml.data.folded.FoldedDataSet
 
getCurrentFoldSize() - Method in class org.encog.ml.data.folded.FoldedDataSet
 
getCurrentGreen() - Method in class org.encog.util.downsample.RGBDownsample
 
getCurrentID() - Method in class org.encog.util.identity.BasicGenerateID
 
getCurrentID() - Method in interface org.encog.util.identity.GenerateID
 
getCurrentLevel() - Method in class org.encog.util.logging.EncogLogging
 
getCurrentPage() - Method in class org.encog.bot.browse.Browser
 
getCurrentRed() - Method in class org.encog.util.downsample.RGBDownsample
 
getCurrentSection() - Method in class org.encog.persist.EncogWriteHelper
 
getCurrentState() - Method in class org.encog.neural.thermal.ThermalNetwork
 
getCycles() - Method in class org.encog.ml.anneal.SimulatedAnnealing
 
getD() - Method in class org.encog.mathutil.matrices.decomposition.EigenvalueDecomposition
Return the block diagonal eigenvalue matrix
getD1() - Method in class org.encog.neural.art.ART1
 
getD1() - Method in class org.encog.neural.pattern.ART1Pattern
 
getData() - Method in class org.encog.app.analyst.csv.basic.BaseCachedColumn
 
getData() - Method in class org.encog.app.analyst.csv.basic.LoadedRow
 
getData() - Method in class org.encog.app.quant.util.BarBuffer
 
getData() - Method in class org.encog.bot.browse.WebPage
 
getData() - Method in class org.encog.mathutil.matrices.Matrix
 
getData() - Method in class org.encog.ml.data.basic.BasicMLData
getData(int) - Method in class org.encog.ml.data.basic.BasicMLData
Get the element specified index value.
getData() - Method in class org.encog.ml.data.basic.BasicMLDataSet
Get the data held by this container.
getData() - Method in interface org.encog.ml.data.MLData
 
getData(int) - Method in interface org.encog.ml.data.MLData
Get the element specified index value.
getData() - Method in class org.encog.ml.data.specific.BiPolarNeuralData
Get the data held by this object as an array of doubles.
getData(int) - Method in class org.encog.ml.data.specific.BiPolarNeuralData
Get the data held by the index.
getData() - Method in class org.encog.ml.kmeans.KMeansCluster
getData() - Method in interface org.encog.ml.MLCluster
 
getDataSize() - Method in class org.encog.bot.browse.WebPage
Get the number of data items in this collection.
getDataUnit(int) - Method in class org.encog.bot.browse.WebPage
Get the DataUnit unit at the specified index.
getDate() - Method in class org.encog.bot.rss.RSSItem
Get the publication date.
getDate(String) - Method in class org.encog.util.csv.ReadCSV
Get the column as a date.
GetDayOfWeek(long) - Static method in class org.encog.util.time.NumericDateUtil
 
getDecimal() - Method in class org.encog.util.csv.CSVFormat
 
getDecimalCharacter() - Static method in class org.encog.util.csv.CSVFormat
Get the decimal character currently in use by the computer's default location.
getDeriv() - Method in class org.encog.neural.pnn.AbstractPNN
 
getDeriv2() - Method in class org.encog.neural.pnn.AbstractPNN
 
getDescription() - Method in class org.encog.bot.rss.RSSItem
Get the description.
getDimensions() - Method in class org.encog.mathutil.rbf.BasicRBF
getDimensions() - Method in interface org.encog.mathutil.rbf.RadialBasisFunction
 
getDisabledConnections() - Method in class org.encog.neural.networks.structure.AnalyzeNetwork
 
getDistance(double[], int) - Method in class org.encog.mathutil.Equilateral
Get the Euclidean distance between the specified data and the set number.
getDouble(int) - Method in class org.encog.util.csv.ReadCSV
Get the column as a double specified by index.
getDouble(String) - Method in class org.encog.util.csv.ReadCSV
Get the specified column as a double.
getDouble(String, boolean, double) - Method in class org.encog.util.ParamsHolder
Get a param as a double.
getDoublePivot() - Method in class org.encog.mathutil.matrices.decomposition.LUDecomposition
Return pivot permutation vector as a one-dimensional double array
getDownSampleBottom() - Method in interface org.encog.util.downsample.Downsample
 
getDownSampleBottom() - Method in class org.encog.util.downsample.RGBDownsample
 
getDownSampleLeft() - Method in interface org.encog.util.downsample.Downsample
 
getDownSampleLeft() - Method in class org.encog.util.downsample.RGBDownsample
 
getDownSampleRight() - Method in interface org.encog.util.downsample.Downsample
 
getDownSampleRight() - Method in class org.encog.util.downsample.RGBDownsample
 
getDownSampleTop() - Method in interface org.encog.util.downsample.Downsample
 
getDownSampleTop() - Method in class org.encog.util.downsample.RGBDownsample
 
getEGB() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
 
getElapsedMilliseconds() - Method in class org.encog.util.Stopwatch
 
getElapsedTicks() - Method in class org.encog.util.Stopwatch
 
getElements() - Method in class org.encog.bot.browse.range.DocumentRange
 
getEncodeLength() - Method in class org.encog.neural.flat.FlatNetwork
 
getEncogType(String) - Method in class org.encog.persist.EncogDirectoryPersistence
Get the type of an Encog object in an EG file, without the need to read the entire file.
getEnd() - Method in class org.encog.bot.browse.range.DocumentRange
 
getEndingIndex() - Method in class org.encog.app.quant.indicators.Indicator
 
getEndTraining() - Method in class org.encog.neural.flat.FlatNetwork
 
getEntries(String, String) - Method in class org.encog.app.analyst.script.prop.PropertyConstraints
Get all entries for a section/subsection.
getEntry(String, String, String) - Method in class org.encog.app.analyst.script.prop.PropertyConstraints
Get a single property entry.
getEntryType() - Method in class org.encog.app.analyst.script.prop.PropertyEntry
 
getEq() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
getEq() - Method in class org.encog.util.arrayutil.NormalizedField
 
getError() - Method in class org.encog.ml.train.BasicTraining
Get the current error percent from the training.
getError() - Method in interface org.encog.ml.train.MLTrain
Get the current error percent from the training.
getError() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
getError() - Method in interface org.encog.neural.flat.train.TrainFlatNetwork
 
getError() - Method in class org.encog.neural.neat.training.NEATTraining
return The error for the best genome.
getError() - Method in class org.encog.neural.networks.training.concurrent.jobs.TrainingJob
 
getError() - Method in class org.encog.neural.networks.training.genetic.NeuralGeneticAlgorithm.NeuralGeneticAlgorithmHelper
 
getError() - Method in class org.encog.neural.networks.training.lma.JacobianChainRule
 
getError() - Method in class org.encog.neural.pnn.AbstractPNN
 
getExclude() - Method in class org.encog.neural.pnn.AbstractPNN
 
getExcluded() - Method in class org.encog.app.analyst.csv.filter.FilterCSV
 
getF1Count() - Method in class org.encog.neural.art.ART1
 
getF1Count() - Method in class org.encog.neural.bam.BAM
 
getF2Count() - Method in class org.encog.neural.art.ART1
 
getF2Count() - Method in class org.encog.neural.bam.BAM
 
getFc() - Method in class org.encog.ml.data.buffer.EncogEGBFile
 
getFetchSize() - Method in class org.encog.ml.data.buffer.codec.SQLCODEC
 
getFieldNumber() - Method in class org.encog.app.analyst.csv.filter.ExcludedField
 
getFields() - Method in class org.encog.app.analyst.script.AnalystScript
 
getFields() - Method in class org.encog.util.arrayutil.TemporalWindowArray
 
getFieldValue() - Method in class org.encog.app.analyst.csv.filter.ExcludedField
 
getFile() - Method in class org.encog.app.analyst.script.segregate.AnalystSegregateTarget
 
getFile() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
 
getFile() - Method in class org.encog.ml.data.buffer.EncogEGBFile
 
getFileExt(File) - Static method in class org.encog.util.file.FileUtil
 
getFilename() - Method in class org.encog.app.analyst.csv.segregate.SegregateTargetPercent
 
getFilename(String) - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Get a filename.
getFilename() - Method in class org.encog.ml.data.specific.CSVNeuralDataSet
 
getFileName(File) - Static method in class org.encog.util.file.FileUtil
 
getFilenames() - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Get all filenames.
getFileVersion() - Method in class org.encog.ml.svm.PersistSVM
 
getFileVersion() - Method in class org.encog.neural.art.PersistART1
getFileVersion() - Method in class org.encog.neural.bam.PersistBAM
getFileVersion() - Method in class org.encog.neural.cpn.PersistCPN
getFileVersion() - Method in class org.encog.neural.neat.PersistNEATNetwork
 
getFileVersion() - Method in class org.encog.neural.neat.PersistNEATPopulation
 
getFileVersion() - Method in class org.encog.neural.networks.PersistBasicNetwork
getFileVersion() - Method in class org.encog.neural.networks.training.propagation.PersistTrainingContinuation
getFileVersion() - Method in class org.encog.neural.pnn.PersistBasicPNN
getFileVersion() - Method in class org.encog.neural.rbf.PersistRBFNetwork
getFileVersion() - Method in class org.encog.neural.som.PersistSOM
getFileVersion() - Method in class org.encog.neural.thermal.PersistBoltzmann
getFileVersion() - Method in class org.encog.neural.thermal.PersistHopfield
getFileVersion() - Method in interface org.encog.persist.EncogPersistor
 
getFilteredRowCount() - Method in class org.encog.app.analyst.csv.filter.FilterCSV
 
getFlat() - Method in class org.encog.neural.networks.BasicNetwork
getFlat() - Method in interface org.encog.neural.networks.ContainsFlat
 
getFlat() - Method in class org.encog.neural.networks.structure.NeuralStructure
 
getFlat() - Method in class org.encog.neural.rbf.RBFNetwork
getFlatTraining() - Method in class org.encog.neural.networks.training.propagation.Propagation
 
getFold() - Method in class org.encog.ml.svm.training.SVMSearchTrain
 
getFold() - Method in class org.encog.ml.svm.training.SVMTrain
 
getFolded() - Method in class org.encog.neural.networks.training.cross.CrossTraining
 
getFormat() - Method in class org.encog.ml.data.specific.CSVNeuralDataSet
 
getFormat() - Method in class org.encog.util.csv.ReadCSV
 
getFrom() - Method in class org.encog.neural.networks.NeuralDataMapping
 
getFrom() - Method in class org.encog.util.time.TimeSpan
 
getFromNeuron() - Method in class org.encog.neural.neat.NEATLink
 
getFromNeuronID() - Method in class org.encog.neural.neat.training.NEATInnovation
 
getFromNeuronID() - Method in class org.encog.neural.neat.training.NEATLinkGene
 
getFull() - Method in class org.encog.app.quant.util.BarBuffer
Determine if the buffer is full.
getGamma() - Method in class org.encog.ml.svm.training.SVMTrain
 
getGammaBegin() - Method in class org.encog.ml.svm.training.SVMSearchTrain
 
getGammaEnd() - Method in class org.encog.ml.svm.training.SVMSearchTrain
 
getGammaStep() - Method in class org.encog.ml.svm.training.SVMSearchTrain
 
getGene(int) - Method in class org.encog.ml.genetic.genome.Chromosome
Get the specified gene.
getGeneIDGenerate() - Method in class org.encog.ml.genetic.population.BasicPopulation
 
getGenes() - Method in class org.encog.ml.genetic.genome.Chromosome
Used the get the entire gene list.
getGenetic() - Method in class org.encog.neural.networks.training.genetic.NeuralGeneticAlgorithm
 
getGeneticAlgorithm() - Method in class org.encog.ml.genetic.genome.BasicGenome
 
getGeneticAlgorithm() - Method in interface org.encog.ml.genetic.genome.Genome
 
getGenomeID() - Method in class org.encog.ml.genetic.genome.BasicGenome
 
getGenomeID() - Method in interface org.encog.ml.genetic.genome.Genome
 
getGenomeIDGenerate() - Method in class org.encog.ml.genetic.population.BasicPopulation
 
getGenomes() - Method in class org.encog.ml.genetic.population.BasicPopulation
getGenomes() - Method in interface org.encog.ml.genetic.population.Population
 
getGensNoImprovement() - Method in class org.encog.ml.genetic.species.BasicSpecies
 
getGensNoImprovement() - Method in interface org.encog.ml.genetic.species.Species
 
getGoal() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
getH() - Method in class org.encog.mathutil.matrices.decomposition.QRDecomposition
Return the Householder vectors
getHasContext() - Method in class org.encog.neural.flat.FlatNetwork
 
getHeader(int) - Method in class org.encog.app.analyst.util.CSVHeaders
Get the specified header.
getHeaderBuffer() - Method in class org.encog.ml.data.buffer.EncogEGBFile
 
getHeaders() - Method in class org.encog.app.analyst.util.CSVHeaders
 
getHeadingMap() - Method in class org.encog.app.analyst.csv.TimeSeriesUtil
 
getHeight() - Method in class org.encog.ml.data.image.ImageNeuralDataSet
 
getHeight() - Method in class org.encog.util.ImageSize
 
getHidden() - Method in class org.encog.neural.prune.PruneIncremental
 
getHidden1Size() - Method in class org.encog.neural.prune.PruneIncremental
 
getHidden2Size() - Method in class org.encog.neural.prune.PruneIncremental
 
getHigh() - Method in class org.encog.engine.network.activation.ActivationRamp
 
getHigh() - Method in class org.encog.engine.network.activation.ActivationStep
 
getHigh() - Method in class org.encog.mathutil.IntRange
 
getHigh() - Method in class org.encog.mathutil.NumericRange
 
getHigh() - Method in class org.encog.neural.prune.PruneIncremental
 
getId() - Method in class org.encog.ml.genetic.genes.BasicGene
 
getId() - Method in interface org.encog.ml.genetic.genes.Gene
Get the ID of this gene, -1 for undefined.
getID() - Method in class org.encog.util.concurrency.TaskGroup
 
getIdAttribute() - Method in class org.encog.bot.browse.range.DocumentRange
 
getIdeal() - Method in class org.encog.ml.data.basic.BasicMLDataPair
getIdeal() - Method in class org.encog.ml.data.buffer.codec.ArrayDataCODEC
 
getIdeal() - Method in interface org.encog.ml.data.MLDataPair
 
getIdealArray() - Method in class org.encog.ml.data.basic.BasicMLDataPair
getIdealArray() - Method in interface org.encog.ml.data.MLDataPair
 
getIdealCount() - Method in class org.encog.ml.data.buffer.EncogEGBFile
 
getIdealSize() - Method in class org.encog.ml.data.basic.BasicMLDataSet
getIdealSize() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
 
getIdealSize() - Method in class org.encog.ml.data.buffer.codec.ArrayDataCODEC
getIdealSize() - Method in class org.encog.ml.data.buffer.codec.CSVDataCODEC
getIdealSize() - Method in interface org.encog.ml.data.buffer.codec.DataSetCODEC
 
getIdealSize() - Method in class org.encog.ml.data.buffer.codec.ExcelCODEC
getIdealSize() - Method in class org.encog.ml.data.buffer.codec.NeuralDataSetCODEC
getIdealSize() - Method in class org.encog.ml.data.buffer.codec.SQLCODEC
getIdealSize() - Method in class org.encog.ml.data.folded.FoldedDataSet
getIdealSize() - Method in interface org.encog.ml.data.MLDataSet
 
getImage() - Method in class org.encog.ml.data.image.ImageNeuralData
 
getImageHeight() - Method in interface org.encog.util.downsample.Downsample
 
getImageHeight() - Method in class org.encog.util.downsample.RGBDownsample
 
getImagEigenvalues() - Method in class org.encog.mathutil.matrices.decomposition.EigenvalueDecomposition
Return the imaginary parts of the eigenvalues.
getImageWidth() - Method in interface org.encog.util.downsample.Downsample
 
getImageWidth() - Method in class org.encog.util.downsample.RGBDownsample
 
getImplementationType() - Method in class org.encog.ml.train.BasicTraining
 
getImplementationType() - Method in interface org.encog.ml.train.MLTrain
 
getImplementationType() - Method in class org.encog.neural.neat.training.NEATTraining
 
getInboundLinks() - Method in class org.encog.neural.neat.NEATNeuron
 
getIncrement() - Method in class org.encog.mathutil.LinearCongruentialGenerator
 
getIndex() - Method in class org.encog.app.analyst.csv.basic.FileData
 
getIndex() - Method in class org.encog.app.analyst.csv.sort.SortedField
 
getIndex() - Method in class org.encog.util.arrayutil.ClassItem
 
getInitialUpdate() - Method in class org.encog.neural.networks.training.concurrent.jobs.RPROPJob
 
getInnovationId() - Method in class org.encog.ml.genetic.genes.BasicGene
 
getInnovationId() - Method in interface org.encog.ml.genetic.genes.Gene
 
getInnovationID() - Method in class org.encog.ml.genetic.innovation.BasicInnovation
 
getInnovationID() - Method in interface org.encog.ml.genetic.innovation.Innovation
 
getInnovationIDGenerate() - Method in class org.encog.ml.genetic.population.BasicPopulation
 
getInnovations() - Method in class org.encog.ml.genetic.innovation.BasicInnovationList
 
getInnovations() - Method in interface org.encog.ml.genetic.innovation.InnovationList
 
getInnovations() - Method in class org.encog.ml.genetic.population.BasicPopulation
getInnovations() - Method in interface org.encog.ml.genetic.population.Population
 
getInnovations() - Method in class org.encog.neural.neat.training.NEATTraining
 
getInnovationType() - Method in class org.encog.neural.neat.training.NEATInnovation
 
getInput() - Method in class org.encog.ml.data.basic.BasicMLDataPair
getInput() - Method in class org.encog.ml.data.buffer.codec.ArrayDataCODEC
 
getInput() - Method in interface org.encog.ml.data.MLDataPair
 
getInput() - Method in class org.encog.util.arrayutil.TemporalWindowField
 
getInputArray() - Method in class org.encog.ml.data.basic.BasicMLDataPair
getInputArray() - Method in interface org.encog.ml.data.MLDataPair
 
getInputCount() - Method in class org.encog.ml.data.buffer.EncogEGBFile
 
getInputCount() - Method in interface org.encog.ml.MLInput
 
getInputCount() - Method in class org.encog.ml.svm.SVM
 
getInputCount() - Method in class org.encog.neural.art.ART1
 
getInputCount() - Method in class org.encog.neural.cpn.CPN
getInputCount() - Method in class org.encog.neural.flat.FlatNetwork
 
getInputCount() - Method in class org.encog.neural.neat.NEATNetwork
 
getInputCount() - Method in class org.encog.neural.neat.NEATPopulation
 
getInputCount() - Method in class org.encog.neural.neat.training.NEATGenome
 
getInputCount() - Method in class org.encog.neural.neat.training.NEATTraining
 
getInputCount() - Method in class org.encog.neural.networks.BasicNetwork
getInputCount() - Method in class org.encog.neural.pnn.AbstractPNN
 
getInputCount() - Method in class org.encog.neural.rbf.RBFNetwork
getInputCount() - Method in class org.encog.neural.som.SOM
getInputCount() - Method in class org.encog.neural.thermal.BoltzmannMachine
getInputCount() - Method in class org.encog.neural.thermal.HopfieldNetwork
getInputFilename() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
getInputFormat() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
getInputHeadings() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
getInputNeuronCount() - Method in class org.encog.neural.som.SOM
Get the input neuron count.
getInputNeuronCount() - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
 
getInputNeurons() - Method in class org.encog.neural.pattern.PNNPattern
 
getInputNeurons() - Method in class org.encog.neural.pattern.SVMPattern
 
getInputSize() - Method in class org.encog.app.analyst.csv.TimeSeriesUtil
 
getInputSize() - Method in class org.encog.ml.data.basic.BasicMLDataSet
getInputSize() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
 
getInputSize() - Method in class org.encog.ml.data.buffer.codec.ArrayDataCODEC
getInputSize() - Method in class org.encog.ml.data.buffer.codec.CSVDataCODEC
getInputSize() - Method in interface org.encog.ml.data.buffer.codec.DataSetCODEC
 
getInputSize() - Method in class org.encog.ml.data.buffer.codec.ExcelCODEC
getInputSize() - Method in class org.encog.ml.data.buffer.codec.NeuralDataSetCODEC
getInputSize() - Method in class org.encog.ml.data.buffer.codec.SQLCODEC
getInputSize() - Method in class org.encog.ml.data.folded.FoldedDataSet
getInputSize() - Method in interface org.encog.ml.data.MLDataSet
 
getInputWindow() - Method in class org.encog.util.arrayutil.TemporalWindowArray
 
getInstance() - Static method in class org.encog.app.analyst.script.prop.PropertyConstraints
 
getInstance() - Static method in class org.encog.Encog
Get the instance to the singleton.
getInstance() - Static method in class org.encog.neural.networks.training.concurrent.ConcurrentTrainingManager
 
getInstance() - Static method in class org.encog.persist.PersistorRegistry
 
getInstance() - Static method in class org.encog.util.concurrency.EngineConcurrency
 
getInstarCount() - Method in class org.encog.neural.cpn.CPN
 
getInt(int) - Method in class org.encog.util.csv.ReadCSV
Obtain a column as an integer referenced by a string.
getInt(String, boolean, int) - Method in class org.encog.util.ParamsHolder
Get a param as a integer.
getItems() - Method in class org.encog.bot.rss.RSS
 
getIteration() - Method in class org.encog.ml.train.BasicTraining
 
getIteration() - Method in interface org.encog.ml.train.MLTrain
 
getIteration() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
getIteration() - Method in interface org.encog.neural.flat.train.TrainFlatNetwork
 
getIteration() - Method in class org.encog.neural.neat.training.NEATTraining
 
getIterations() - Method in class org.encog.neural.prune.PruneIncremental
 
getJacobian() - Method in interface org.encog.neural.networks.training.lma.ComputeJacobian
 
getJacobian() - Method in class org.encog.neural.networks.training.lma.JacobianChainRule
 
getJobUnit() - Method in class org.encog.util.concurrency.job.JobUnitContext
 
getKernel() - Method in class org.encog.neural.pattern.PNNPattern
 
getKernel() - Method in class org.encog.neural.pnn.AbstractPNN
 
getKernelType() - Method in class org.encog.ml.svm.SVM
 
getKey() - Method in class org.encog.app.analyst.script.prop.PropertyEntry
 
getL() - Method in class org.encog.mathutil.matrices.decomposition.CholeskyDecomposition
Return triangular factor.
getL() - Method in class org.encog.mathutil.matrices.decomposition.LUDecomposition
Return lower triangular factor
getL() - Method in class org.encog.neural.art.ART1
 
getL() - Method in class org.encog.neural.pattern.ART1Pattern
 
getLagDepth() - Method in class org.encog.app.analyst.csv.TimeSeriesUtil
 
getLagDepth() - Method in class org.encog.app.analyst.EncogAnalyst
 
getLagWindowSize() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
getLastDelta() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkBackPropagation
 
getLastDelta() - Method in class org.encog.neural.networks.training.propagation.back.Backpropagation
 
getLastGradient() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
 
getLastValue() - Method in class org.encog.util.arrayutil.TemporalWindowField
 
getLayerBiasActivation(int) - Method in class org.encog.neural.networks.BasicNetwork
Get the bias activation for the specified layer.
getLayerContextCount() - Method in class org.encog.neural.flat.FlatNetwork
 
getLayerCount() - Method in class org.encog.neural.networks.BasicNetwork
 
getLayerCounts() - Method in class org.encog.neural.flat.FlatNetwork
 
getLayerFeedCounts() - Method in class org.encog.neural.flat.FlatNetwork
 
getLayerIndex() - Method in class org.encog.neural.flat.FlatNetwork
 
getLayerNeuronCount(int) - Method in class org.encog.neural.networks.BasicNetwork
Get the neuron count.
getLayerOutput() - Method in class org.encog.neural.flat.FlatNetwork
 
getLayerOutput(int, int) - Method in class org.encog.neural.networks.BasicNetwork
Get the layer output for the specified neuron.
getLayers() - Method in class org.encog.neural.networks.structure.NeuralStructure
 
getLayerTotalNeuronCount(int) - Method in class org.encog.neural.networks.BasicNetwork
Get the total (including bias and context) neuron cont for a layer.
getLeadDepth() - Method in class org.encog.app.analyst.csv.TimeSeriesUtil
 
getLeadDepth() - Method in class org.encog.app.analyst.EncogAnalyst
 
getLeader() - Method in class org.encog.ml.genetic.species.BasicSpecies
 
getLeader() - Method in interface org.encog.ml.genetic.species.Species
 
getLeadWindowSize() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
getLearningRate() - Method in class org.encog.neural.cpn.training.TrainInstar
getLearningRate() - Method in class org.encog.neural.cpn.training.TrainOutstar
getLearningRate() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkBackPropagation
 
getLearningRate() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkManhattan
 
getLearningRate() - Method in class org.encog.neural.networks.training.concurrent.jobs.BPROPJob
 
getLearningRate() - Method in interface org.encog.neural.networks.training.LearningRate
 
getLearningRate() - Method in class org.encog.neural.networks.training.propagation.back.Backpropagation
 
getLearningRate() - Method in class org.encog.neural.networks.training.propagation.manhattan.ManhattanPropagation
 
getLearningRate() - Method in class org.encog.neural.networks.training.simple.TrainAdaline
getLearningRate() - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
 
getLines() - Method in class org.encog.app.analyst.script.task.AnalystTask
 
getLines() - Method in class org.encog.persist.EncogFileSection
 
getLinesAsString() - Method in class org.encog.persist.EncogFileSection
 
getLink() - Method in class org.encog.bot.rss.RSSItem
Get the hyperlink.
getLinks() - Method in class org.encog.neural.neat.training.NEATGenome
 
getLinksChromosome() - Method in class org.encog.neural.neat.training.NEATGenome
 
getListeners() - Method in class org.encog.app.analyst.EncogAnalyst
 
getLow() - Method in class org.encog.engine.network.activation.ActivationRamp
 
getLow() - Method in class org.encog.engine.network.activation.ActivationStep
 
getLow() - Method in class org.encog.mathutil.IntRange
 
getLow() - Method in class org.encog.mathutil.NumericRange
 
getLow() - Method in class org.encog.neural.prune.PruneIncremental
 
getManager() - Method in interface org.encog.neural.networks.training.concurrent.performers.ConcurrentTrainingPerformer
Get the manager.
getManager() - Method in class org.encog.neural.networks.training.concurrent.performers.ConcurrentTrainingPerformerCPU
Get the manager.
getMap() - Method in class org.encog.util.http.CookieUtility
Allows access to the name/value pair list of cookies.
getMatingPopulation() - Method in class org.encog.ml.genetic.GeneticAlgorithm
Get the mating population.
getMatrix(int, int, int, int) - Method in class org.encog.mathutil.matrices.Matrix
Get a submatrix.
getMatrix(int, int, int[]) - Method in class org.encog.mathutil.matrices.Matrix
Get a submatrix.
getMatrix(int[], int, int) - Method in class org.encog.mathutil.matrices.Matrix
Get a submatrix.
getMatrix(int[], int[]) - Method in class org.encog.mathutil.matrices.Matrix
Get a submatrix.
getMax() - Method in class org.encog.app.analyst.script.DataField
 
getMax() - Method in class org.encog.mathutil.randomize.RangeRandomizer
 
getMax() - Method in class org.encog.neural.prune.HiddenLayerParams
 
getMaxError() - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
 
getMaxIteration() - Method in class org.encog.app.analyst.EncogAnalyst
 
getMaxStep() - Method in class org.encog.neural.networks.training.concurrent.jobs.RPROPJob
 
getMaxWinners() - Method in class org.encog.engine.network.activation.ActivationCompetitive
 
getMean() - Method in class org.encog.app.analyst.script.DataField
 
getMean() - Method in class org.encog.mathutil.NumericRange
 
getMembers() - Method in class org.encog.ml.genetic.species.BasicSpecies
 
getMembers() - Method in interface org.encog.ml.genetic.species.Species
 
getMemoryScore() - Method in class org.encog.util.benchmark.EncogBenchmark
 
getMethod() - Method in class org.encog.bot.browse.range.Form
 
getMethod() - Method in class org.encog.ml.svm.training.SVMSearchTrain
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.ml.svm.training.SVMTrain
Get the current best machine learning method from the training.
getMethod() - Method in interface org.encog.ml.train.MLTrain
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.neural.cpn.training.TrainInstar
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.neural.cpn.training.TrainOutstar
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.neural.neat.training.NEATTraining
 
getMethod() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealing
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.neural.networks.training.cross.CrossTraining
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.neural.networks.training.genetic.NeuralGeneticAlgorithm
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.neural.networks.training.genetic.NeuralGeneticAlgorithm.NeuralGeneticAlgorithmHelper
Get the current best neural network.
getMethod() - Method in class org.encog.neural.networks.training.lma.LevenbergMarquardtTraining
 
getMethod() - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.neural.networks.training.propagation.Propagation
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.neural.networks.training.simple.TrainAdaline
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.neural.rbf.training.SVDTraining
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
Get the current best machine learning method from the training.
getMethod() - Method in class org.encog.neural.som.training.clustercopy.SOMClusterCopyTraining
Get the current best machine learning method from the training.
getMethodType() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
getMin() - Method in class org.encog.app.analyst.script.DataField
 
getMin() - Method in class org.encog.mathutil.randomize.RangeRandomizer
 
getMin() - Method in class org.encog.neural.prune.HiddenLayerParams
 
getMinClassCount() - Method in class org.encog.app.analyst.script.DataField
Determine the minimum class count.
getMinImprovement() - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
 
getMinutePeriod(int, int) - Static method in class org.encog.util.time.NumericDateUtil
 
getMinutes() - Method in class org.encog.ml.train.strategy.end.EndMinutesStrategy
 
getMinutesLeft() - Method in class org.encog.ml.train.strategy.end.EndMinutesStrategy
 
getMode() - Static method in class org.encog.mathutil.error.ErrorCalculation
get the error calculation mode, this is static and therefore global to all Enocg training.
getModel() - Method in class org.encog.ml.svm.SVM
 
getModulus() - Method in class org.encog.mathutil.LinearCongruentialGenerator
 
getMomentum() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkBackPropagation
 
getMomentum() - Method in class org.encog.neural.networks.training.concurrent.jobs.BPROPJob
 
getMomentum() - Method in interface org.encog.neural.networks.training.Momentum
 
getMomentum() - Method in class org.encog.neural.networks.training.propagation.back.Backpropagation
 
getMonth(long) - Static method in class org.encog.util.time.NumericDateUtil
 
getMultiplier() - Method in class org.encog.mathutil.LinearCongruentialGenerator
 
getMutate() - Method in class org.encog.ml.genetic.GeneticAlgorithm
 
getMutationPercent() - Method in class org.encog.ml.genetic.GeneticAlgorithm
Get the mutation percent.
getName() - Method in class org.encog.app.analyst.commands.Cmd
 
getName() - Method in class org.encog.app.analyst.commands.CmdBalance
getName() - Method in class org.encog.app.analyst.commands.CmdCluster
getName() - Method in class org.encog.app.analyst.commands.CmdCreate
getName() - Method in class org.encog.app.analyst.commands.CmdEvaluate
getName() - Method in class org.encog.app.analyst.commands.CmdEvaluateRaw
getName() - Method in class org.encog.app.analyst.commands.CmdGenerate
getName() - Method in class org.encog.app.analyst.commands.CmdNormalize
getName() - Method in class org.encog.app.analyst.commands.CmdRandomize
getName() - Method in class org.encog.app.analyst.commands.CmdReset
getName() - Method in class org.encog.app.analyst.commands.CmdSegregate
getName() - Method in class org.encog.app.analyst.commands.CmdSet
getName() - Method in class org.encog.app.analyst.commands.CmdTrain
getName() - Method in class org.encog.app.analyst.csv.basic.BaseCachedColumn
 
getName() - Method in class org.encog.app.analyst.script.AnalystClassItem
 
getName() - Method in class org.encog.app.analyst.script.DataField
 
getName() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
getName() - Method in class org.encog.app.analyst.script.prop.PropertyEntry
 
getName() - Method in class org.encog.app.analyst.script.task.AnalystTask
 
getName() - Method in class org.encog.bot.browse.range.FormElement
 
getName() - Method in class org.encog.ml.factory.parse.ArchitectureLayer
 
getName() - Method in class org.encog.ml.genetic.population.BasicPopulation
 
getName() - Method in class org.encog.parse.tags.Tag
 
getName() - Method in class org.encog.util.arrayutil.ClassItem
 
getName() - Method in class org.encog.util.arrayutil.NormalizedField
 
getName() - Method in class org.encog.util.arrayutil.TemporalWindowField
 
getNeatActivationFunction() - Method in class org.encog.neural.neat.NEATPopulation
 
getNeighborhood() - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
 
getNetwork() - Method in interface org.encog.neural.flat.train.gradient.FlatGradientWorker
 
getNetwork() - Method in class org.encog.neural.flat.train.gradient.GradientWorkerCPU
getNetwork() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
getNetwork() - Method in interface org.encog.neural.flat.train.TrainFlatNetwork
 
getNetwork() - Method in class org.encog.neural.networks.layers.BasicLayer
 
getNetwork() - Method in interface org.encog.neural.networks.layers.Layer
 
getNetwork() - Method in class org.encog.neural.networks.structure.NeuralStructure
 
getNetwork() - Method in class org.encog.neural.networks.training.concurrent.jobs.TrainingJob
 
getNetwork() - Method in class org.encog.neural.prune.PruneSelective
 
getNetworkDepth() - Method in class org.encog.neural.neat.NEATNetwork
 
getNetworkDepth() - Method in class org.encog.neural.neat.training.NEATGenome
 
getNeuronCount() - Method in class org.encog.neural.flat.FlatNetwork
 
getNeuronCount() - Method in class org.encog.neural.networks.layers.BasicLayer
 
getNeuronCount() - Method in interface org.encog.neural.networks.layers.Layer
 
getNeuronCount() - Method in class org.encog.neural.thermal.ThermalNetwork
 
getNeuronID() - Method in class org.encog.neural.neat.NEATNeuron
 
getNeuronID() - Method in class org.encog.neural.neat.training.NEATInnovation
 
getNeurons() - Method in class org.encog.neural.neat.NEATNetwork
 
getNeurons() - Method in class org.encog.neural.neat.training.NEATGenome
 
getNeuronsChromosome() - Method in class org.encog.neural.neat.training.NEATGenome
 
getNeuronType() - Method in class org.encog.neural.neat.NEATNeuron
 
getNeuronType() - Method in class org.encog.neural.neat.training.NEATInnovation
 
getNeuronType() - Method in class org.encog.neural.neat.training.NEATNeuronGene
 
getNormalize() - Method in class org.encog.app.analyst.script.AnalystScript
 
getNormalizedFields() - Method in class org.encog.app.analyst.script.normalize.AnalystNormalize
 
getNormalizedHigh() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
getNormalizedHigh() - Method in class org.encog.util.arrayutil.NormalizeArray
 
getNormalizedHigh() - Method in class org.encog.util.arrayutil.NormalizedField
 
getNormalizedLow() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
getNormalizedLow() - Method in class org.encog.util.arrayutil.NormalizeArray
 
getNormalizedLow() - Method in class org.encog.util.arrayutil.NormalizedField
 
getNoTasks() - Method in class org.encog.util.concurrency.TaskGroup
 
getNoWinner() - Method in class org.encog.neural.art.ART1
 
getNumber() - Method in class org.encog.neural.networks.training.concurrent.performers.ConcurrentTrainingPerformerCPU
 
getNumberFormatter() - Method in class org.encog.util.csv.CSVFormat
 
getNumberOfRecords() - Method in class org.encog.ml.data.buffer.EncogEGBFile
 
getNumberRemaining() - Method in class org.encog.app.analyst.csv.segregate.SegregateTargetPercent
 
getNumFolds() - Method in class org.encog.ml.data.folded.FoldedDataSet
 
getNumGenes() - Method in class org.encog.neural.neat.training.NEATGenome
 
getNumSigmas() - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
 
getNumThreads() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
getNumThreads() - Method in interface org.encog.neural.flat.train.TrainFlatNetwork
 
getNumThreads() - Method in class org.encog.neural.networks.training.propagation.Propagation
 
getNumToSpawn() - Method in class org.encog.ml.genetic.species.BasicSpecies
 
getNumToSpawn() - Method in interface org.encog.ml.genetic.species.Species
 
getOldAgePenalty() - Method in class org.encog.ml.genetic.population.BasicPopulation
getOldAgePenalty() - Method in interface org.encog.ml.genetic.population.Population
 
getOldAgeThreshold() - Method in class org.encog.ml.genetic.population.BasicPopulation
getOldAgeThreshold() - Method in interface org.encog.ml.genetic.population.Population
 
getOrganism() - Method in class org.encog.ml.genetic.genome.BasicGenome
 
getOrganism() - Method in interface org.encog.ml.genetic.genome.Genome
 
getOriginal() - Method in class org.encog.bot.browse.Address
 
getOutmodel() - Method in class org.encog.neural.pattern.PNNPattern
 
getOutput() - Method in class org.encog.neural.neat.NEATNeuron
 
getOutput() - Method in class org.encog.neural.networks.training.cross.NetworkFold
 
getOutputActivationFunction() - Method in class org.encog.neural.neat.NEATNetwork
 
getOutputActivationFunction() - Method in class org.encog.neural.neat.NEATPopulation
 
getOutputboundLinks() - Method in class org.encog.neural.neat.NEATNeuron
 
getOutputCount() - Method in interface org.encog.ml.MLOutput
 
getOutputCount() - Method in class org.encog.ml.svm.SVM
 
getOutputCount() - Method in class org.encog.neural.art.ART1
 
getOutputCount() - Method in class org.encog.neural.cpn.CPN
getOutputCount() - Method in class org.encog.neural.flat.FlatNetwork
 
getOutputCount() - Method in class org.encog.neural.neat.NEATNetwork
 
getOutputCount() - Method in class org.encog.neural.neat.NEATPopulation
 
getOutputCount() - Method in class org.encog.neural.neat.training.NEATGenome
 
getOutputCount() - Method in class org.encog.neural.neat.training.NEATTraining
 
getOutputCount() - Method in class org.encog.neural.networks.BasicNetwork
getOutputCount() - Method in class org.encog.neural.pnn.AbstractPNN
 
getOutputCount() - Method in class org.encog.neural.rbf.RBFNetwork
getOutputCount() - Method in class org.encog.neural.som.SOM
getOutputCount() - Method in class org.encog.neural.thermal.BoltzmannMachine
getOutputCount() - Method in class org.encog.neural.thermal.HopfieldNetwork
getOutputFormat() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
getOutputMode() - Method in class org.encog.neural.pnn.AbstractPNN
 
getOutputNeuronCount() - Method in class org.encog.neural.som.SOM
Get the output neuron count.
getOutputNeuronCount() - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
 
getOutputNeurons() - Method in class org.encog.neural.pattern.PNNPattern
 
getOutputNeurons() - Method in class org.encog.neural.pattern.SVMPattern
 
getOutputSize() - Method in class org.encog.app.analyst.csv.TimeSeriesUtil
 
getOutstarCount() - Method in class org.encog.neural.cpn.CPN
 
getOwner() - Method in class org.encog.bot.browse.range.FormElement
 
getOwner() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
 
getOwner() - Method in class org.encog.ml.data.folded.FoldedDataSet
 
getOwner() - Method in class org.encog.util.concurrency.job.JobUnitContext
 
getParamActivationMutationRate() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamChanceAddLink() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamChanceAddNode() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamChanceAddRecurrentLink() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamCompatibilityThreshold() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamCrossoverRate() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamMaxActivationPerturbation() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamMaxNumberOfSpecies() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamMaxPermittedNeurons() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamMaxWeightPerturbation() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamMutationRate() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamNames() - Method in class org.encog.engine.network.activation.ActivationBiPolar
getParamNames() - Method in class org.encog.engine.network.activation.ActivationCompetitive
getParamNames() - Method in interface org.encog.engine.network.activation.ActivationFunction
 
getParamNames() - Method in class org.encog.engine.network.activation.ActivationGaussian
getParamNames() - Method in class org.encog.engine.network.activation.ActivationLinear
getParamNames() - Method in class org.encog.engine.network.activation.ActivationLOG
getParamNames() - Method in class org.encog.engine.network.activation.ActivationRamp
getParamNames() - Method in class org.encog.engine.network.activation.ActivationSigmoid
getParamNames() - Method in class org.encog.engine.network.activation.ActivationSIN
getParamNames() - Method in class org.encog.engine.network.activation.ActivationSoftMax
getParamNames() - Method in class org.encog.engine.network.activation.ActivationStep
getParamNames() - Method in class org.encog.engine.network.activation.ActivationTANH
getParamNumAddLinkAttempts() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamNumGensAllowedNoImprovement() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamNumTrysToFindLoopedLink() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamNumTrysToFindOldLink() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParamProbabilityWeightReplaced() - Method in class org.encog.neural.neat.training.NEATTraining
 
getParams() - Method in class org.encog.engine.network.activation.ActivationBiPolar
getParams() - Method in class org.encog.engine.network.activation.ActivationCompetitive
getParams() - Method in interface org.encog.engine.network.activation.ActivationFunction
 
getParams() - Method in class org.encog.engine.network.activation.ActivationGaussian
getParams() - Method in class org.encog.engine.network.activation.ActivationLinear
getParams() - Method in class org.encog.engine.network.activation.ActivationLOG
getParams() - Method in class org.encog.engine.network.activation.ActivationRamp
getParams() - Method in class org.encog.engine.network.activation.ActivationSigmoid
getParams() - Method in class org.encog.engine.network.activation.ActivationSIN
getParams() - Method in class org.encog.engine.network.activation.ActivationSoftMax
getParams() - Method in class org.encog.engine.network.activation.ActivationStep
getParams() - Method in class org.encog.engine.network.activation.ActivationTANH
getParams() - Method in class org.encog.ml.factory.parse.ArchitectureLayer
 
getParams() - Method in class org.encog.ml.svm.SVM
 
getParams() - Method in class org.encog.util.ParamsHolder
 
getParent() - Method in class org.encog.bot.browse.range.DocumentRange
 
getParent() - Method in class org.encog.persist.EncogDirectoryPersistence
 
getPattern() - Method in class org.encog.neural.prune.PruneIncremental
 
getPeak() - Method in class org.encog.mathutil.rbf.BasicRBF
Get the center of this RBD.
getPeak() - Method in interface org.encog.mathutil.rbf.RadialBasisFunction
Get the center of this RBD.
getPercent() - Method in class org.encog.app.analyst.csv.segregate.SegregateTargetPercent
 
getPercent() - Method in class org.encog.app.analyst.script.segregate.AnalystSegregateTarget
 
getPercentToMate() - Method in class org.encog.ml.genetic.GeneticAlgorithm
Get the percent to mate.
getPeriods() - Method in class org.encog.app.quant.indicators.Indicator
 
getPeriods() - Method in class org.encog.app.quant.indicators.MovingAverage
 
getPeriods() - Method in class org.encog.app.quant.indicators.predictive.BestClose
 
getPeriods() - Method in class org.encog.app.quant.indicators.predictive.BestReturn
 
getPersistClassString() - Method in class org.encog.ml.svm.PersistSVM
getPersistClassString() - Method in class org.encog.neural.art.PersistART1
getPersistClassString() - Method in class org.encog.neural.bam.PersistBAM
getPersistClassString() - Method in class org.encog.neural.cpn.PersistCPN
getPersistClassString() - Method in class org.encog.neural.neat.PersistNEATNetwork
 
getPersistClassString() - Method in class org.encog.neural.neat.PersistNEATPopulation
 
getPersistClassString() - Method in class org.encog.neural.networks.PersistBasicNetwork
getPersistClassString() - Method in class org.encog.neural.networks.training.propagation.PersistTrainingContinuation
getPersistClassString() - Method in class org.encog.neural.pnn.PersistBasicPNN
getPersistClassString() - Method in class org.encog.neural.rbf.PersistRBFNetwork
getPersistClassString() - Method in class org.encog.neural.som.PersistSOM
getPersistClassString() - Method in class org.encog.neural.thermal.PersistBoltzmann
getPersistClassString() - Method in class org.encog.neural.thermal.PersistHopfield
getPersistClassString() - Method in interface org.encog.persist.EncogPersistor
 
getPersistor(Class<?>) - Method in class org.encog.persist.PersistorRegistry
Get a persistor.
getPersistor(String) - Method in class org.encog.persist.PersistorRegistry
Get the persistor by name.
getPivot() - Method in class org.encog.mathutil.matrices.decomposition.LUDecomposition
Return pivot permutation vector
getPixelMap() - Method in interface org.encog.util.downsample.Downsample
 
getPixelMap() - Method in class org.encog.util.downsample.RGBDownsample
 
getPluginDescription() - Method in interface org.encog.plugin.EncogPluginBase
 
getPluginFrameworkVersion() - Method in interface org.encog.plugin.EncogPluginBase
 
getPluginName() - Method in interface org.encog.plugin.EncogPluginBase
 
getPluginType() - Method in interface org.encog.plugin.EncogPluginBase
 
getPluginVersion() - Method in interface org.encog.plugin.EncogPluginBase
 
getPopulation() - Method in class org.encog.ml.genetic.GeneticAlgorithm
 
getPopulation() - Method in class org.encog.ml.genetic.genome.BasicGenome
 
getPopulation() - Method in interface org.encog.ml.genetic.genome.Genome
 
getPopulation() - Method in class org.encog.ml.genetic.species.BasicSpecies
 
getPopulationSize() - Method in class org.encog.ml.genetic.population.BasicPopulation
getPopulationSize() - Method in interface org.encog.ml.genetic.population.Population
 
getPosX() - Method in class org.encog.neural.neat.NEATNeuron
 
getPosY() - Method in class org.encog.neural.neat.NEATNeuron
 
getPrecision() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
getPrecision() - Method in class org.encog.app.analyst.script.AnalystScript
 
getPrecision() - Method in class org.encog.app.quant.loader.yahoo.YahooDownload
 
getPrecision() - Method in class org.encog.app.quant.ninja.NinjaStreamWriter
 
getPredict() - Method in class org.encog.util.arrayutil.TemporalWindowField
 
getPredictWindow() - Method in class org.encog.util.arrayutil.TemporalWindowArray
 
getPriors() - Method in class org.encog.neural.pnn.BasicPNN
 
getProblem() - Method in class org.encog.ml.svm.training.SVMTrain
 
getProp() - Method in class org.encog.app.analyst.commands.Cmd
 
getProperties() - Method in class org.encog.app.analyst.script.AnalystScript
 
getProperties() - Method in class org.encog.Encog
 
getProperties() - Method in class org.encog.ml.BasicML
 
getProperties() - Method in interface org.encog.ml.MLProperties
 
getProperty(String) - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Get a property as an object.
getPropertyBoolean(String) - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Get a property as a boolean.
getPropertyCSVFormat(String) - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Get a property as a format.
getPropertyDouble(String) - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Get a property as a double.
getPropertyDouble(String) - Method in class org.encog.ml.BasicML
Get the specified property as a double.
getPropertyDouble(String) - Method in interface org.encog.ml.MLProperties
Get the specified property as a double.
getPropertyFile(String) - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Get a property as a file.
getPropertyFormat(String) - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Get a property as a format.
getPropertyInt(String) - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Get a property as a int.
getPropertyLong(String) - Method in class org.encog.ml.BasicML
Get the specified property as a long.
getPropertyLong(String) - Method in interface org.encog.ml.MLProperties
Get the specified property as a long.
getPropertyString(String) - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Get a property as a string.
getPropertyString(String) - Method in class org.encog.ml.BasicML
Get the specified property as a string.
getPropertyString(String) - Method in interface org.encog.ml.MLProperties
Get the specified property as a string.
getPropertyURL(String) - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Get a property as a url.
getQ() - Method in class org.encog.mathutil.matrices.decomposition.QRDecomposition
Generate and return the (economy-sized) orthogonal factor
getR() - Method in class org.encog.mathutil.matrices.decomposition.QRDecomposition
Return the upper triangular factor
getRadius() - Method in class org.encog.neural.som.training.basic.neighborhood.NeighborhoodBubble
 
getRadius() - Method in interface org.encog.neural.som.training.basic.neighborhood.NeighborhoodFunction
 
getRadius() - Method in class org.encog.neural.som.training.basic.neighborhood.NeighborhoodRBF
 
getRadius() - Method in class org.encog.neural.som.training.basic.neighborhood.NeighborhoodRBF1D
 
getRadius() - Method in class org.encog.neural.som.training.basic.neighborhood.NeighborhoodSingle
The radius for this neighborhood function is always 1.
getRaf() - Method in class org.encog.ml.data.buffer.EncogEGBFile
 
getRandom() - Method in class org.encog.mathutil.randomize.BasicRandomizer
 
getRange() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
getRatioX() - Method in interface org.encog.util.downsample.Downsample
 
getRatioX() - Method in class org.encog.util.downsample.RGBDownsample
 
getRatioY() - Method in interface org.encog.util.downsample.Downsample
 
getRatioY() - Method in class org.encog.util.downsample.RGBDownsample
 
getRBF() - Method in class org.encog.neural.flat.FlatNetworkRBF
 
getRBF() - Method in class org.encog.neural.rbf.RBFNetwork
Get the RBF's.
getRBF() - Method in class org.encog.neural.som.training.basic.neighborhood.NeighborhoodRBF
 
getRealEigenvalues() - Method in class org.encog.mathutil.matrices.decomposition.EigenvalueDecomposition
Return the real parts of the eigenvalues.
getRecord(long, MLDataPair) - Method in class org.encog.ml.data.basic.BasicMLDataSet
Read an individual record, specified by index, in random order.
getRecord(long, MLDataPair) - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Read an individual record.
getRecord(long, MLDataPair) - Method in class org.encog.ml.data.folded.FoldedDataSet
Read an individual record, specified by index, in random order.
getRecord(long, MLDataPair) - Method in interface org.encog.ml.data.MLDataSet
Read an individual record, specified by index, in random order.
getRecordBuffer() - Method in class org.encog.ml.data.buffer.EncogEGBFile
 
getRecordCount() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
getRecordCount() - Method in class org.encog.ml.data.basic.BasicMLDataSet
Determine the total number of records in the set.
getRecordCount() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
 
getRecordCount() - Method in class org.encog.ml.data.buffer.EncogEGBFile
 
getRecordCount() - Method in class org.encog.ml.data.folded.FoldedDataSet
Determine the total number of records in the set.
getRecordCount() - Method in interface org.encog.ml.data.MLDataSet
Determine the total number of records in the set.
getRecordSize() - Method in class org.encog.ml.data.buffer.EncogEGBFile
 
getReport() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
getReportInterval() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
getResult() - Method in class org.encog.ml.data.buffer.MemoryDataLoader
 
getResults() - Method in class org.encog.neural.prune.PruneIncremental
 
getRevertData() - Method in class org.encog.app.analyst.EncogAnalyst
 
getRms() - Method in class org.encog.mathutil.NumericRange
 
getRootLogger() - Static method in class org.encog.util.logging.Logging
 
getRow() - Method in class org.encog.app.analyst.csv.ClusterRow
 
getRow(int) - Method in class org.encog.mathutil.matrices.Matrix
Get the specified row as a sub-matrix.
getRowErrors() - Method in interface org.encog.neural.networks.training.lma.ComputeJacobian
 
getRowErrors() - Method in class org.encog.neural.networks.training.lma.JacobianChainRule
 
getRows() - Method in class org.encog.mathutil.matrices.Matrix
Get the number of rows in the matrix.
getRunCycles() - Method in class org.encog.neural.pattern.BoltzmannPattern
 
getRunCycles() - Method in class org.encog.neural.thermal.BoltzmannMachine
 
getS() - Method in class org.encog.mathutil.matrices.decomposition.SingularValueDecomposition
Return the diagonal matrix of singular values
getSamples() - Method in class org.encog.mathutil.NumericRange
 
getSamples() - Method in class org.encog.neural.pnn.BasicPNN
 
getScore() - Method in class org.encog.ml.anneal.SimulatedAnnealing
 
getScore() - Method in class org.encog.ml.genetic.genome.BasicGenome
 
getScore() - Method in interface org.encog.ml.genetic.genome.Genome
 
getScript() - Method in class org.encog.app.analyst.commands.Cmd
 
getScript() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
getScript() - Method in class org.encog.app.analyst.EncogAnalyst
 
getSection() - Method in class org.encog.app.analyst.script.prop.PropertyEntry
 
getSectionName() - Method in class org.encog.persist.EncogFileSection
 
getSeed() - Method in class org.encog.mathutil.LinearCongruentialGenerator
 
getSegregate() - Method in class org.encog.app.analyst.script.AnalystScript
 
getSegregateTargets() - Method in class org.encog.app.analyst.script.segregate.AnalystSegregate
 
getSeparator() - Method in class org.encog.util.csv.CSVFormat
 
getShouldStop() - Method in class org.encog.util.concurrency.job.ConcurrentJob
 
getSigma() - Method in class org.encog.neural.pnn.BasicPNN
 
getSigmaHigh() - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
 
getSigmaLow() - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
 
getSingularValues() - Method in class org.encog.mathutil.matrices.decomposition.SingularValueDecomposition
Return the one-dimensional array of singular values
getSlice(int) - Method in class org.encog.app.analyst.util.CSVHeaders
Get the timeslice for the specified index.
getSortOrder() - Method in class org.encog.app.analyst.csv.sort.SortCSV
 
getSortType() - Method in class org.encog.app.analyst.csv.sort.SortedField
 
getSource() - Method in class org.encog.bot.browse.range.DocumentRange
 
getSpan(TimeUnit) - Method in class org.encog.util.time.TimeSpan
Get the time span specified by the unit.
getSpawnsRequired() - Method in class org.encog.ml.genetic.species.BasicSpecies
 
getSpawnsRequired() - Method in interface org.encog.ml.genetic.species.Species
 
getSpecies() - Method in class org.encog.ml.genetic.population.BasicPopulation
getSpecies() - Method in interface org.encog.ml.genetic.population.Population
 
getSpeciesID() - Method in class org.encog.ml.genetic.species.BasicSpecies
 
getSpeciesID() - Method in interface org.encog.ml.genetic.species.Species
 
getSpeciesID() - Method in class org.encog.neural.neat.training.NEATGenome
 
getSpeciesIDGenerate() - Method in class org.encog.ml.genetic.population.BasicPopulation
 
getSplitX() - Method in class org.encog.neural.neat.NEATNeuron
 
getSplitX() - Method in class org.encog.neural.neat.training.NEATInnovation
 
getSplitX() - Method in class org.encog.neural.neat.training.NEATNeuronGene
 
getSplitY() - Method in class org.encog.neural.neat.NEATNeuron
 
getSplitY(int) - Method in class org.encog.neural.neat.training.NEATGenome
Get the specified split y.
getSplitY() - Method in class org.encog.neural.neat.training.NEATInnovation
 
getSplitY() - Method in class org.encog.neural.neat.training.NEATNeuronGene
 
getStandardDeviation() - Method in class org.encog.app.analyst.script.DataField
 
getStandardDeviation() - Method in class org.encog.mathutil.NumericRange
 
getStartTemperature() - Method in class org.encog.ml.anneal.SimulatedAnnealing
 
getStats() - Method in class org.encog.util.arrayutil.NormalizeArray
 
getStatus() - Method in class org.encog.ml.data.buffer.BinaryDataLoader
 
getStatus() - Method in class org.encog.ml.data.buffer.MemoryDataLoader
 
getStopTemperature() - Method in class org.encog.ml.anneal.SimulatedAnnealing
 
getStrategies() - Method in class org.encog.ml.train.BasicTraining
 
getStrategies() - Method in interface org.encog.ml.train.MLTrain
 
getStrategies() - Method in class org.encog.neural.neat.training.NEATTraining
Returns an empty list, strategies are not supported.
getStrategies() - Method in class org.encog.neural.networks.training.concurrent.jobs.TrainingJob
 
getString(String, boolean, String) - Method in class org.encog.util.ParamsHolder
Get a param as a string.
getStructure() - Method in class org.encog.neural.networks.BasicNetwork
 
getSubSectionName() - Method in class org.encog.persist.EncogFileSection
 
getSumActivation() - Method in class org.encog.neural.neat.NEATNeuron
 
getSumSqr() - Method in class org.encog.ml.kmeans.KMeansCluster
 
getSurvivalRate() - Method in class org.encog.ml.genetic.population.BasicPopulation
getSurvivalRate() - Method in interface org.encog.ml.genetic.population.Population
 
getSVMType() - Method in class org.encog.ml.svm.SVM
 
getTag() - Method in class org.encog.bot.dataunit.TagDataUnit
 
getTag() - Method in class org.encog.parse.tags.read.ReadTags
Return the last tag found, this is normally called just after the read function returns a zero.
getTarget() - Method in class org.encog.bot.browse.range.Link
 
getTargetField() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
getTargets() - Method in class org.encog.app.analyst.csv.segregate.SegregateCSV
 
getTask(String) - Method in class org.encog.app.analyst.script.AnalystScript
Get the specified task.
getTaskNumber() - Method in class org.encog.util.concurrency.job.JobUnitContext
 
getTasks() - Method in class org.encog.app.analyst.script.AnalystScript
 
getTemperature() - Method in class org.encog.ml.anneal.SimulatedAnnealing
 
getTemperature() - Method in class org.encog.neural.pattern.BoltzmannPattern
 
getTemperature() - Method in class org.encog.neural.thermal.BoltzmannMachine
 
getTempLeaderID() - Method in class org.encog.ml.genetic.species.BasicSpecies
 
getText() - Method in class org.encog.bot.dataunit.TextDataUnit
 
getTextOnly() - Method in class org.encog.bot.browse.range.DocumentRange
Get the text from this range.
getThreadCount() - Method in class org.encog.util.concurrency.DetermineWorkload
 
getThreshold() - Method in class org.encog.neural.thermal.BoltzmannMachine
 
getThresholdHigh() - Method in class org.encog.engine.network.activation.ActivationRamp
 
getThresholdLow() - Method in class org.encog.engine.network.activation.ActivationRamp
 
getTimeSlice() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
getTitle() - Method in class org.encog.bot.browse.WebPage
Get the title for this document.
getTitle() - Method in class org.encog.bot.rss.RSSItem
Get the item title.
getTo() - Method in class org.encog.neural.networks.NeuralDataMapping
 
getTo() - Method in class org.encog.util.time.TimeSpan
 
getToNeuron() - Method in class org.encog.neural.neat.NEATLink
 
getToNeuronID() - Method in class org.encog.neural.neat.training.NEATInnovation
 
getToNeuronID() - Method in class org.encog.neural.neat.training.NEATLinkGene
 
getTopErrors() - Method in class org.encog.neural.prune.PruneIncremental
 
getTopNetworks() - Method in class org.encog.neural.prune.PruneIncremental
 
getTotalConnections() - Method in class org.encog.neural.networks.structure.AnalyzeNetwork
 
getTotalCount() - Method in class org.encog.neural.flat.FlatLayer
 
getTotalDepth() - Method in class org.encog.app.analyst.csv.TimeSeriesUtil
 
getTrain() - Method in class org.encog.neural.networks.training.concurrent.jobs.TrainingJob
 
getTraining() - Method in class org.encog.ml.train.BasicTraining
 
getTraining() - Method in interface org.encog.ml.train.MLTrain
 
getTraining() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
getTraining() - Method in interface org.encog.neural.flat.train.TrainFlatNetwork
 
getTraining() - Method in class org.encog.neural.neat.training.NEATTraining
Returns null, does not use a training set, rather uses a score function.
getTraining() - Method in class org.encog.neural.networks.training.concurrent.jobs.TrainingJob
 
getTraining() - Method in class org.encog.neural.prune.PruneIncremental
 
getTrainingType() - Method in class org.encog.neural.networks.training.propagation.TrainingContinuation
 
getType() - Method in class org.encog.bot.browse.range.Input
 
getType() - Method in class org.encog.parse.tags.Tag
 
getU() - Method in class org.encog.mathutil.matrices.decomposition.LUDecomposition
Return upper triangular factor
getU() - Method in class org.encog.mathutil.matrices.decomposition.SingularValueDecomposition
Return the left singular vectors
getUnderlying() - Method in class org.encog.ml.data.folded.FoldedDataSet
 
getUpdateValues() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkResilient
 
getUrl() - Method in class org.encog.bot.browse.Address
 
getV() - Method in class org.encog.mathutil.matrices.decomposition.EigenvalueDecomposition
Return the eigenvector matrix.
getV() - Method in class org.encog.mathutil.matrices.decomposition.SingularValueDecomposition
Return the right singular vectors
getValue() - Method in class org.encog.bot.browse.range.FormElement
 
getValue() - Method in class org.encog.ml.genetic.genes.CharGene
 
getValue() - Method in class org.encog.ml.genetic.genes.DoubleGene
 
getValue() - Method in class org.encog.ml.genetic.genes.IntegerGene
 
getVigilance() - Method in class org.encog.neural.art.ART1
 
getVigilance() - Method in class org.encog.neural.pattern.ART1Pattern
 
getWCSS() - Method in class org.encog.ml.kmeans.KMeansClustering
 
getWeight() - Method in class org.encog.neural.neat.NEATLink
 
getWeight() - Method in class org.encog.neural.neat.training.NEATLinkGene
 
getWeight(int, int, int) - Method in class org.encog.neural.networks.BasicNetwork
Get the weight between the two layers.
getWeight(int, int) - Method in class org.encog.neural.thermal.ThermalNetwork
Get a weight.
getWeightIndex() - Method in class org.encog.neural.flat.FlatNetwork
 
getWeights() - Method in class org.encog.neural.flat.FlatNetwork
 
getWeights() - Method in interface org.encog.neural.flat.train.gradient.FlatGradientWorker
 
getWeights() - Method in class org.encog.neural.flat.train.gradient.GradientWorkerCPU
 
getWeights() - Method in class org.encog.neural.networks.structure.AnalyzeNetwork
 
getWeights() - Method in class org.encog.neural.networks.training.cross.NetworkFold
 
getWeights() - Method in class org.encog.neural.som.SOM
 
getWeights() - Method in class org.encog.neural.thermal.ThermalNetwork
 
getWeightsAndBias() - Method in class org.encog.neural.networks.structure.AnalyzeNetwork
 
getWeightsF1toF2() - Method in class org.encog.neural.art.ART1
 
getWeightsF1toF2() - Method in class org.encog.neural.bam.BAM
 
getWeightsF2toF1() - Method in class org.encog.neural.art.ART1
 
getWeightsF2toF1() - Method in class org.encog.neural.bam.BAM
 
getWeightsInputToInstar() - Method in class org.encog.neural.cpn.CPN
 
getWeightsInstarToOutstar() - Method in class org.encog.neural.cpn.CPN
 
getWeightValues() - Method in class org.encog.neural.networks.structure.AnalyzeNetwork
 
getWidth() - Method in class org.encog.engine.network.activation.ActivationGaussian
 
getWidth() - Method in class org.encog.mathutil.rbf.BasicRBF
getWidth() - Method in interface org.encog.mathutil.rbf.RadialBasisFunction
 
getWidth() - Method in class org.encog.ml.data.image.ImageNeuralDataSet
 
getWidth() - Method in class org.encog.util.ImageSize
 
getWinner() - Method in class org.encog.neural.art.ART1
 
getWinnerCount() - Method in class org.encog.neural.cpn.CPN
 
getWorstDistance() - Method in class org.encog.neural.som.training.basic.BestMatchingUnit
 
getX1() - Method in class org.encog.neural.networks.training.pnn.GlobalMinimumSearch
 
getX2() - Method in class org.encog.neural.networks.training.pnn.GlobalMinimumSearch
 
getX3() - Method in class org.encog.neural.networks.training.pnn.GlobalMinimumSearch
 
getXMLText(Node) - Static method in class org.encog.bot.rss.RSS
Simple utility method that obtains the text of an XML node.
getY1() - Method in class org.encog.neural.networks.training.pnn.GlobalMinimumSearch
 
getY2() - Method in class org.encog.neural.networks.training.pnn.GlobalMinimumSearch
 
getY3() - Method in class org.encog.neural.networks.training.pnn.GlobalMinimumSearch
 
getYear(long) - Static method in class org.encog.util.time.NumericDateUtil
 
getYoungBonusAgeThreshold() - Method in class org.encog.ml.genetic.population.BasicPopulation
getYoungBonusAgeThreshold() - Method in interface org.encog.ml.genetic.population.Population
 
getYoungScoreBonus() - Method in class org.encog.ml.genetic.population.BasicPopulation
getYoungScoreBonus() - Method in interface org.encog.ml.genetic.population.Population
 
GlobalMinimumSearch - Class in org.encog.neural.networks.training.pnn
Search sigma's for a global minimum.
GlobalMinimumSearch() - Constructor for class org.encog.neural.networks.training.pnn.GlobalMinimumSearch
 
gradients - Variable in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
The gradients.
GradientWorkerCPU - Class in org.encog.neural.flat.train.gradient
Worker class for the mulithreaded training of flat networks.
GradientWorkerCPU(FlatNetwork, TrainFlatNetworkProp, MLDataSet, int, int) - Constructor for class org.encog.neural.flat.train.gradient.GradientWorkerCPU
Construct a gradient worker.
Greedy - Class in org.encog.ml.train.strategy
A simple greedy strategy.
Greedy() - Constructor for class org.encog.ml.train.strategy.Greedy
 

H

h1(String) - Method in class org.encog.util.HTMLReport
 
h2(String) - Method in class org.encog.util.HTMLReport
 
h3(String) - Method in class org.encog.util.HTMLReport
 
hasBias() - Method in class org.encog.neural.flat.FlatLayer
 
hasBias() - Method in interface org.encog.neural.networks.layers.Layer
 
hasDerivative() - Method in class org.encog.engine.network.activation.ActivationBiPolar
 
hasDerivative() - Method in class org.encog.engine.network.activation.ActivationCompetitive
 
hasDerivative() - Method in interface org.encog.engine.network.activation.ActivationFunction
 
hasDerivative() - Method in class org.encog.engine.network.activation.ActivationGaussian
 
hasDerivative() - Method in class org.encog.engine.network.activation.ActivationLinear
 
hasDerivative() - Method in class org.encog.engine.network.activation.ActivationLOG
 
hasDerivative() - Method in class org.encog.engine.network.activation.ActivationRamp
 
hasDerivative() - Method in class org.encog.engine.network.activation.ActivationSigmoid
 
hasDerivative() - Method in class org.encog.engine.network.activation.ActivationSIN
 
hasDerivative() - Method in class org.encog.engine.network.activation.ActivationSoftMax
 
hasDerivative() - Method in class org.encog.engine.network.activation.ActivationStep
 
hasDerivative() - Method in class org.encog.engine.network.activation.ActivationTANH
 
hashCode() - Method in class org.encog.mathutil.matrices.Matrix
Compute a hash code for this matrix.
hashCode() - Method in class org.encog.ml.genetic.genes.IntegerGene
 
hashCode() - Method in class org.encog.neural.networks.BasicNetwork
Generate a hash code.
hasNext() - Method in class org.encog.ml.data.basic.BasicMLDataSet.BasicMLIterator
hasNext() - Method in class org.encog.ml.data.buffer.BufferedDataSetIterator
 
hasNext() - Method in class org.encog.ml.data.folded.FoldedIterator
hasSameActivationFunction() - Method in class org.encog.neural.flat.FlatNetwork
Neural networks with only one type of activation function offer certain optimization options.
hasWinner() - Method in class org.encog.neural.art.ART1
 
haveSameDate(Date, Date) - Static method in class org.encog.util.time.NumericDateUtil
 
header(String) - Method in class org.encog.util.HTMLReport
 
HEADER_DATASOURCE_RAW_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "HEADER:DATASOURCE_rawFile".
HEADER_DATASOURCE_SOURCE_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "HEADER:DATASOURCE_sourceFile".
HEADER_DATASOURCE_SOURCE_FORMAT - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "HEADER:DATASOURCE_sourceFormat".
HEADER_DATASOURCE_SOURCE_HEADERS - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "HEADER:DATASOURCE_sourceHeaders".
HEADER_SIZE - Static variable in class org.encog.ml.data.buffer.EncogEGBFile
The size of the file header.
HiddenLayerParams - Class in org.encog.neural.prune
Specifies the minimum and maximum neuron counts for a layer.
HiddenLayerParams(int, int) - Constructor for class org.encog.neural.prune.HiddenLayerParams
Construct a hidden layer param object with the specified min and max values.
HIGH - Static variable in class org.encog.app.analyst.csv.basic.FileData
The high value.
HopfieldNetwork - Class in org.encog.neural.thermal
Implements a Hopfield network.
HopfieldNetwork() - Constructor for class org.encog.neural.thermal.HopfieldNetwork
Default constructor.
HopfieldNetwork(int) - Constructor for class org.encog.neural.thermal.HopfieldNetwork
Construct a Hopfield with the specified neuron count.
HopfieldPattern - Class in org.encog.neural.pattern
Create a Hopfield pattern.
HopfieldPattern() - Constructor for class org.encog.neural.pattern.HopfieldPattern
 
HOUR_OFFSET - Static variable in class org.encog.util.time.NumericDateUtil
 
HOURS_DAY - Static variable in class org.encog.util.time.TimeSpan
Hours in a day.
HTMLReport - Class in org.encog.util
 
HTMLReport() - Constructor for class org.encog.util.HTMLReport
 
HUNDRED_PERCENT - Static variable in class org.encog.util.Format
One hundred percent.
HybridStrategy - Class in org.encog.ml.train.strategy
A hybrid stragey allows a secondary training algorithm to be used.
HybridStrategy(MLTrain) - Constructor for class org.encog.ml.train.strategy.HybridStrategy
Construct a hybrid strategy with the default minimum improvement and toleration cycles.
HybridStrategy(MLTrain, double, int, int) - Constructor for class org.encog.ml.train.strategy.HybridStrategy
Create a hybrid strategy.
hypot(double, double) - Static method in class org.encog.mathutil.EncogMath
sqrt(a^2 + b^2) without under/overflow.

I

IDATA - Static variable in class org.encog.persist.PersistConst
idata.
identity(int) - Static method in class org.encog.mathutil.matrices.MatrixMath
Return an identity matrix of the specified size.
ImageNeuralData - Class in org.encog.ml.data.image
An extension of the BasicNeuralData class that is designed to hold images for input into a neural network.
ImageNeuralData(Image) - Constructor for class org.encog.ml.data.image.ImageNeuralData
Construct an object based on an image.
ImageNeuralDataSet - Class in org.encog.ml.data.image
Store a collection of images for training with a neural network.
ImageNeuralDataSet(Downsample, boolean, double, double) - Constructor for class org.encog.ml.data.image.ImageNeuralDataSet
Construct this class with the specified downsampler.
ImageSize - Class in org.encog.util
Simple class to determine the size of an image.
ImageSize(Image) - Constructor for class org.encog.util.ImageSize
Determine the size of an image.
imageUpdate(Image, int, int, int, int, int) - Method in class org.encog.util.ImageSize
The image has been updated.
increaseCount() - Method in class org.encog.app.analyst.script.AnalystClassItem
Increase the count.
index - Variable in class org.encog.mathutil.libsvm.svm_node
 
INDEX_DJIA - Static variable in class org.encog.app.quant.loader.yahoo.YahooDownload
The Dow Jones Industrial Average.
INDEX_FILE - Static variable in class org.encog.util.http.URLUtility
The name of the usual default document.
INDEX_NASDAQ - Static variable in class org.encog.app.quant.loader.yahoo.YahooDownload
The NASDAQ.
INDEX_SP500 - Static variable in class org.encog.app.quant.loader.yahoo.YahooDownload
The S&P 500.
indexOfLargest(double[]) - Static method in class org.encog.util.EngineArray
 
Indicator - Class in org.encog.app.quant.indicators
An indicator, used by Encog.
Indicator(String, boolean, boolean) - Constructor for class org.encog.app.quant.indicators.Indicator
Construct the indicator.
init() - Method in class org.encog.app.analyst.script.AnalystScript
Init this script.
init() - Method in class org.encog.app.analyst.script.normalize.AnalystField
Init any internal structures.
init(AnalystScript) - Method in class org.encog.app.analyst.script.normalize.AnalystNormalize
Init the normalized fields.
init(MLTrain) - Method in class org.encog.ml.train.strategy.end.EndIterationsStrategy
Initialize this strategy.
init(MLTrain) - Method in class org.encog.ml.train.strategy.end.EndMaxErrorStrategy
Initialize this strategy.
init(MLTrain) - Method in class org.encog.ml.train.strategy.end.EndMinutesStrategy
Initialize this strategy.
init(MLTrain) - Method in class org.encog.ml.train.strategy.Greedy
Initialize this strategy.
init(MLTrain) - Method in class org.encog.ml.train.strategy.HybridStrategy
Initialize this strategy.
init(MLTrain) - Method in class org.encog.ml.train.strategy.RequiredImprovementStrategy
Initialize this strategy.
init(MLTrain) - Method in class org.encog.ml.train.strategy.ResetStrategy
Initialize this strategy.
init(MLTrain) - Method in class org.encog.ml.train.strategy.StopTrainingStrategy
Initialize this strategy.
init(MLTrain) - Method in interface org.encog.ml.train.strategy.Strategy
Initialize this strategy.
init(FlatLayer[]) - Method in class org.encog.neural.flat.FlatNetwork
Construct a flat network.
init(MLTrain) - Method in class org.encog.neural.networks.training.strategy.SmartLearningRate
Initialize this strategy.
init(MLTrain) - Method in class org.encog.neural.networks.training.strategy.SmartMomentum
Initialize this strategy.
init() - Method in class org.encog.neural.prune.PruneIncremental
Init for prune.
init(int, double[], double[]) - Method in class org.encog.neural.thermal.ThermalNetwork
Init the network.
init() - Method in class org.encog.util.arrayutil.NormalizedField
Init any internal structures.
INITIAL_DEPTH - Static variable in class org.encog.parse.PeekableInputStream
The depth to peek.
Innovation - Interface in org.encog.ml.genetic.innovation
Provides the interface for an innovation.
InnovationList - Interface in org.encog.ml.genetic.innovation
Defines a list of innovations.
innovationTypeToString(NEATInnovationType) - Static method in class org.encog.neural.neat.PersistNEATPopulation
 
Input - Class in org.encog.bot.browse.range
A form element that represents for input for text.
Input(WebPage) - Constructor for class org.encog.bot.browse.range.Input
Construct this Input element.
INPUT_COUNT - Static variable in class org.encog.persist.PersistConst
The input count.
inputNeuronCount - Variable in class org.encog.neural.som.SOM
Number of input neurons.
INSTAR - Static variable in class org.encog.persist.PersistConst
Instar.
int2Time(Date, int) - Static method in class org.encog.util.time.NumericDateUtil
 
IntegerGene - Class in org.encog.ml.genetic.genes
A gene that contains an integer value.
IntegerGene() - Constructor for class org.encog.ml.genetic.genes.IntegerGene
 
IntRange - Class in org.encog.mathutil
A range of integers.
IntRange(int, int) - Constructor for class org.encog.mathutil.IntRange
Construct an integer range.
inverse() - Method in class org.encog.mathutil.matrices.decomposition.LUDecomposition
Solves a set of equation systems of type A * X = B.
inverse() - Method in class org.encog.mathutil.matrices.Matrix
 
InverseMultiquadricFunction - Class in org.encog.mathutil.rbf
Multi-dimensional Inverse Multiquadric function.
InverseMultiquadricFunction(double, double, double) - Constructor for class org.encog.mathutil.rbf.InverseMultiquadricFunction
Construct a single-dimension Inverse-Multiquadric function with the specified peak, centers and widths.
InverseMultiquadricFunction(double, double[], double) - Constructor for class org.encog.mathutil.rbf.InverseMultiquadricFunction
Construct a multi-dimension Inverse-Multiquadric function with the specified peak, centers and widths.
InverseMultiquadricFunction(int) - Constructor for class org.encog.mathutil.rbf.InverseMultiquadricFunction
Create centered at zero, width 0, and peak 0.
is(String, boolean) - Method in class org.encog.parse.tags.read.ReadTags
Checks to see if the next tag is the tag specified.
isAnalyzed() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
isAscending() - Method in class org.encog.app.analyst.csv.sort.SortedField
 
isAutoSend() - Method in class org.encog.bot.browse.range.FormElement
 
isAutoSend() - Method in class org.encog.bot.browse.range.Input
 
isBetterThan(double, double) - Method in class org.encog.ml.genetic.genome.GenomeComparator
Determine if one score is better than the other.
isBias() - Method in class org.encog.ml.factory.parse.ArchitectureLayer
 
isClass() - Method in class org.encog.app.analyst.script.DataField
 
isClassify() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
isClassify() - Method in enum org.encog.util.arrayutil.NormalizationAction
 
isClassify() - Method in class org.encog.util.arrayutil.NormalizedField
 
isComplete() - Method in class org.encog.app.analyst.script.DataField
 
isConnected(int, int, int) - Method in class org.encog.neural.networks.BasicNetwork
Determine if the specified connection is enabled.
isConnectionLimited() - Method in class org.encog.neural.networks.structure.NeuralStructure
 
isDuplicateLink(long, long) - Method in class org.encog.neural.neat.training.NEATGenome
Determine if this is a duplicate link.
isEnabled() - Method in class org.encog.ml.genetic.genes.BasicGene
 
isEnabled() - Method in interface org.encog.ml.genetic.genes.Gene
 
isExpectInputHeaders() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
isForceWinner() - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
 
isFullRank() - Method in class org.encog.mathutil.matrices.decomposition.QRDecomposition
Is the matrix full rank?
isGenerated(String) - Method in class org.encog.app.analyst.script.AnalystScript
Determine if the specified file was generated.
isIdentifier() - Method in class org.encog.util.SimpleParser
 
isIgnore() - Method in class org.encog.app.analyst.csv.basic.BaseCachedColumn
 
isIgnored() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
isIncludeTargetField() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
isInput() - Method in class org.encog.app.analyst.csv.basic.BaseCachedColumn
 
isInput() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
isInstanceOf(Class<?>, Class<?>) - Static method in class org.encog.util.obj.ReflectionUtil
Determine if one class is an instance of the other class.
isInteger() - Method in class org.encog.app.analyst.script.DataField
 
isLayerBiased(int) - Method in class org.encog.neural.networks.BasicNetwork
Determine if the specified layer is biased.
isLimited() - Method in class org.encog.neural.flat.FlatNetwork
 
isLoadToMemory() - Method in class org.encog.neural.networks.training.concurrent.jobs.TrainingJob
 
isNonsingular() - Method in class org.encog.mathutil.matrices.decomposition.LUDecomposition
Is the matrix nonsingular?
isOutput() - Method in class org.encog.app.analyst.csv.basic.BaseCachedColumn
 
isOutput() - Method in class org.encog.app.analyst.script.normalize.AnalystField
 
isPrimitive(Object) - Static method in class org.encog.util.obj.ReflectionUtil
Determine if the specified object is a primitive.
isProduceOutputHeaders() - Method in class org.encog.app.analyst.csv.basic.BasicFile
 
isReal() - Method in class org.encog.app.analyst.script.DataField
 
isRecurrent() - Method in class org.encog.neural.neat.NEATLink
 
isRecurrent() - Method in class org.encog.neural.neat.training.NEATLinkGene
 
isRecurrent() - Method in class org.encog.neural.neat.training.NEATNeuronGene
 
isRegression() - Method in class org.encog.neural.pattern.SVMPattern
 
isSeparateClass() - Method in class org.encog.neural.pnn.AbstractPNN
 
isShouldMinimize() - Method in class org.encog.ml.anneal.SimulatedAnnealing
 
isSimple(Object) - Static method in class org.encog.util.obj.ReflectionUtil
Determine if an object is "simple", that is it should be persisted just with a .tostring.
isSingleThreaded() - Method in class org.encog.neural.networks.training.concurrent.ConcurrentTrainingManager
 
isSnapshot() - Method in class org.encog.neural.neat.NEATNetwork
 
isSnapshot() - Method in class org.encog.neural.neat.NEATPopulation
 
isSnapshot() - Method in class org.encog.neural.neat.training.NEATTraining
 
isSPD() - Method in class org.encog.mathutil.matrices.decomposition.CholeskyDecomposition
Is the matrix symmetric and positive definite?
isSupervised() - Method in class org.encog.ml.data.basic.BasicMLDataPair
isSupervised() - Method in class org.encog.ml.data.basic.BasicMLDataSet
isSupervised() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
 
isSupervised() - Method in class org.encog.ml.data.folded.FoldedDataSet
isSupervised() - Method in interface org.encog.ml.data.MLDataPair
 
isSupervised() - Method in interface org.encog.ml.data.MLDataSet
 
isTaskBalance() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
isTaskCluster() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
isTaskNormalize() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
isTaskRandomize() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
isTaskSegregate() - Method in class org.encog.app.analyst.wizard.AnalystWizard
 
isTimeSeries() - Method in class org.encog.app.analyst.EncogAnalyst
 
isTrained() - Method in class org.encog.neural.pnn.AbstractPNN
 
isTrainingDone() - Method in class org.encog.ml.svm.training.SVMSearchTrain
 
isTrainingDone() - Method in class org.encog.ml.svm.training.SVMTrain
 
isTrainingDone() - Method in class org.encog.ml.train.BasicTraining
 
isTrainingDone() - Method in interface org.encog.ml.train.MLTrain
 
isTrainingDone() - Method in class org.encog.neural.neat.training.NEATTraining
 
isUseBayesianRegularization() - Method in class org.encog.neural.networks.training.lma.LevenbergMarquardtTraining
 
isUsedDefault() - Method in class org.encog.ml.factory.parse.ArchitectureLayer
 
isValidResume(TrainingContinuation) - Method in class org.encog.neural.networks.training.propagation.back.Backpropagation
Determine if the specified continuation object is valid to resume with.
isValidResume(TrainingContinuation) - Method in class org.encog.neural.networks.training.propagation.resilient.ResilientPropagation
Determine if the specified continuation object is valid to resume with.
isVector() - Method in class org.encog.mathutil.matrices.Matrix
Determine if the matrix is a vector.
isWhiteSpace() - Method in class org.encog.util.SimpleParser
 
isZero() - Method in class org.encog.mathutil.matrices.Matrix
Return true if every value in the matrix is zero.
iteration() - Method in class org.encog.ml.anneal.SimulatedAnnealing
Called to perform one cycle of the annealing process.
iteration() - Method in class org.encog.ml.genetic.BasicGeneticAlgorithm
Modify the weight matrix and bias values based on the last call to calcError.
iteration() - Method in class org.encog.ml.genetic.GeneticAlgorithm
Perform one training iteration.
iteration() - Method in class org.encog.ml.kmeans.KMeansClustering
Perform a single training iteration.
iteration(int) - Method in class org.encog.ml.kmeans.KMeansClustering
The number of iterations to perform.
iteration() - Method in interface org.encog.ml.MLClustering
Perform the training iteration.
iteration(int) - Method in interface org.encog.ml.MLClustering
Perform the specified number of training iterations.
iteration() - Method in class org.encog.ml.svm.training.SVMSearchTrain
Perform one training iteration.
iteration() - Method in class org.encog.ml.svm.training.SVMTrain
Perform either a train or a cross validation.
iteration(int) - Method in class org.encog.ml.train.BasicTraining
Perform the specified number of training iterations.
iteration() - Method in interface org.encog.ml.train.MLTrain
Perform one iteration of training.
iteration(int) - Method in interface org.encog.ml.train.MLTrain
Perform a number of training iterations.
iteration() - Method in class org.encog.neural.cpn.training.TrainInstar
Perform one iteration of training.
iteration() - Method in class org.encog.neural.cpn.training.TrainOutstar
Perform one iteration of training.
iteration() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
Perform one training iteration.
iteration(int) - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
Perform the specified number of training iterations.
iteration() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkSCG
Perform one iteration.
iteration() - Method in interface org.encog.neural.flat.train.TrainFlatNetwork
Perform one training iteration.
iteration(int) - Method in interface org.encog.neural.flat.train.TrainFlatNetwork
Perform one training iteration.
iteration() - Method in class org.encog.neural.neat.training.NEATTraining
Perform one training iteration.
iteration(int) - Method in class org.encog.neural.neat.training.NEATTraining
Perform the specified number of training iterations.
iteration() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealing
Perform one iteration of simulated annealing.
iteration() - Method in class org.encog.neural.networks.training.cross.CrossValidationKFold
Perform one iteration.
iteration() - Method in class org.encog.neural.networks.training.genetic.NeuralGeneticAlgorithm
Perform one training iteration.
iteration() - Method in class org.encog.neural.networks.training.lma.LevenbergMarquardtTraining
Perform one iteration.
iteration() - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
Perform one iteration of training.
iteration() - Method in class org.encog.neural.networks.training.propagation.Propagation
Perform one training iteration.
iteration(int) - Method in class org.encog.neural.networks.training.propagation.Propagation
Perform the specified number of training iterations.
iteration() - Method in class org.encog.neural.networks.training.simple.TrainAdaline
Perform one iteration of training.
iteration() - Method in class org.encog.neural.rbf.training.SVDTraining
Perform one iteration.
iteration() - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
Perform one training iteration.
iteration() - Method in class org.encog.neural.som.training.clustercopy.SOMClusterCopyTraining
Perform one iteration of training.
iterator() - Method in class org.encog.ml.data.basic.BasicMLDataSet
iterator() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
 
iterator() - Method in class org.encog.ml.data.folded.FoldedDataSet

J

JacobianChainRule - Class in org.encog.neural.networks.training.lma
Calculate the Jacobian using the chain rule.
JacobianChainRule(BasicNetwork, MLDataSet) - Constructor for class org.encog.neural.networks.training.lma.JacobianChainRule
Construct the chain rule calculation.
jobDone(long, ConcurrentTrainingPerformerCPU) - Method in class org.encog.neural.networks.training.concurrent.ConcurrentTrainingManager
Wait for job to finish.
JobUnitContext - Class in org.encog.util.concurrency.job
The job unit context contains context information to be passed to a job unit.
JobUnitContext() - Constructor for class org.encog.util.concurrency.job.JobUnitContext
 
JobUnitWorker - Class in org.encog.util.concurrency.job
An individual worker, that will be submitted to the thread pool.
JobUnitWorker(JobUnitContext) - Constructor for class org.encog.util.concurrency.job.JobUnitWorker
Construct a job unit.
join() - Method in class org.encog.neural.networks.training.concurrent.ConcurrentTrainingManager
Wait for all tasks to finish.
JordanPattern - Class in org.encog.neural.pattern
This class is used to generate an Jordan style recurrent neural network.
JordanPattern() - Constructor for class org.encog.neural.pattern.JordanPattern
Construct an object to create a Jordan type neural network.

K

KERNEL - Static variable in class org.encog.persist.PersistConst
Kernel.
kernel_type - Variable in class org.encog.mathutil.libsvm.svm_parameter
 
kernelToString(PNNKernelType) - Static method in class org.encog.neural.pnn.PersistBasicPNN
Convert a kernel type to a string.
KernelType - Enum in org.encog.ml.svm
The type of SVM kernel in use.
KMeansCluster - Class in org.encog.ml.kmeans
Holds a cluster of MLData items that have been clustered by the KMeansClustering class.
KMeansCluster() - Constructor for class org.encog.ml.kmeans.KMeansCluster
 
KMeansClustering - Class in org.encog.ml.kmeans
This class performs a basic K-Means clustering.
KMeansClustering(int, MLDataSet) - Constructor for class org.encog.ml.kmeans.KMeansClustering
Construct the K-Means object.

L

l - Variable in class org.encog.mathutil.libsvm.svm_model
 
l - Variable in class org.encog.mathutil.libsvm.svm_problem
 
label - Variable in class org.encog.mathutil.libsvm.svm_model
 
LAMBDA_MAX - Static variable in class org.encog.neural.networks.training.lma.LevenbergMarquardtTraining
The max amount for the LAMBDA.
LAST_DELTA - Static variable in class org.encog.neural.networks.training.propagation.back.Backpropagation
The resume key for backpropagation.
LAST_GRADIENTS - Static variable in class org.encog.neural.networks.training.propagation.resilient.ResilientPropagation
Continuation tag for the last gradients.
Layer - Interface in org.encog.neural.networks.layers
This interface defines all necessary methods for a neural network layer.
learn() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
Apply and learn.
LEARNING_DECAY - Static variable in class org.encog.neural.networks.training.strategy.SmartLearningRate
Learning decay rate.
LearningRate - Interface in org.encog.neural.networks.training
Specifies that a training algorithm has the concept of a learning rate.
learnLimited() - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
Apply and learn.
LEVEL_CRITICAL - Static variable in class org.encog.util.logging.EncogLogging
 
LEVEL_DEBUG - Static variable in class org.encog.util.logging.EncogLogging
 
LEVEL_ERROR - Static variable in class org.encog.util.logging.EncogLogging
 
LEVEL_INFO - Static variable in class org.encog.util.logging.EncogLogging
 
LevenbergMarquardtTraining - Class in org.encog.neural.networks.training.lma
Trains a neural network using a Levenberg Marquardt algorithm (LMA).
LevenbergMarquardtTraining(BasicNetwork, MLDataSet) - Constructor for class org.encog.neural.networks.training.lma.LevenbergMarquardtTraining
Construct the LMA object.
LIBSVM_VERSION - Static variable in class org.encog.mathutil.libsvm.svm
 
LINEAR - Static variable in class org.encog.mathutil.libsvm.svm_parameter
 
LinearCongruentialGenerator - Class in org.encog.mathutil
A predictable random number generator.
LinearCongruentialGenerator(long) - Constructor for class org.encog.mathutil.LinearCongruentialGenerator
Construct the default LCG.
LinearCongruentialGenerator(long, long, long, long) - Constructor for class org.encog.mathutil.LinearCongruentialGenerator
Create a LCG with the specified modulus, multiplier and increment.
Link - Class in org.encog.bot.browse.range
A document range that represents a hyperlink, and any embedded tags and text.
Link(WebPage) - Constructor for class org.encog.bot.browse.range.Link
Construct a link from the specified web page.
LINKS - Static variable in class org.encog.persist.PersistConst
Links.
LIST - Static variable in class org.encog.persist.PersistConst
List.
listItem(String) - Method in class org.encog.util.HTMLReport
 
listToDouble(Collection<?>) - Static method in class org.encog.util.EngineArray
Convert the collection to an array list of doubles.
LMAFactory - Class in org.encog.ml.factory.train
This class is a factory to create the LMA training method.
LMAFactory() - Constructor for class org.encog.ml.factory.train.LMAFactory
 
load(File) - Method in class org.encog.app.analyst.EncogAnalyst
Load the specified script file.
load(InputStream) - Method in class org.encog.app.analyst.EncogAnalyst
Load from an input stream.
load(String) - Method in class org.encog.app.analyst.EncogAnalyst
Load from the specified filename.
load(InputStream) - Method in class org.encog.app.analyst.script.AnalystScript
Load the script.
load(InputStream) - Method in class org.encog.app.analyst.script.ScriptLoad
Load an Encog script.
load(InputStream) - Method in class org.encog.bot.browse.LoadWebPage
Load a web page from the specified stream.
load(String) - Method in class org.encog.bot.browse.LoadWebPage
Load the web page from a string that contains HTML.
load(URL) - Method in class org.encog.bot.rss.RSS
Load all RSS data from the specified URL.
load(URL, int) - Method in class org.encog.bot.rss.RSS
Load all RSS data from the specified URL.
load(Node) - Method in class org.encog.bot.rss.RSSItem
Load an item from the specified node.
load(MLDataSet) - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Load the specified training set.
load(File) - Static method in class org.encog.util.obj.SerializeObject
Load an object.
loadAllData(String, File, CSVFormat, Date, Date) - Method in class org.encog.app.quant.loader.yahoo.YahooDownload
Load all data.
loadClassmap() - Static method in class org.encog.util.obj.ReflectionUtil
Load the classmap file.
loadContents() - Method in class org.encog.bot.browse.LoadWebPage
Using the data units, which should have already been loaded by this time, load the contents of the web page.
loadCookies(URLConnection) - Method in class org.encog.util.http.CookieUtility
Load any cookies from the specified URLConnection object.
loadCSV2Memory(String, int, int, boolean, CSVFormat) - Static method in class org.encog.util.simple.EncogUtility
Load CSV to memory.
loadCSVTOMemory(CSVFormat, String, boolean, int, int) - Static method in class org.encog.util.simple.TrainingSetUtil
Load a CSV file into a memory dataset.
loadDataUnits(InputStream) - Method in class org.encog.bot.browse.LoadWebPage
Load the data units.
LoadedRow - Class in org.encog.app.analyst.csv.basic
A row of a CSV file loaded to memory.
LoadedRow(ReadCSV) - Constructor for class org.encog.app.analyst.csv.basic.LoadedRow
Load a row from the specified CSV file.
LoadedRow(ReadCSV, int) - Constructor for class org.encog.app.analyst.csv.basic.LoadedRow
Construct a loaded row.
loadEGB2Memory(File) - Static method in class org.encog.util.simple.EncogUtility
 
LoaderError - Exception in org.encog.app.quant.loader
Used to represent any error that occurs in the loader part of Encog.
LoaderError(String) - Constructor for exception org.encog.app.quant.loader.LoaderError
Construct a message exception.
LoaderError(Throwable) - Constructor for exception org.encog.app.quant.loader.LoaderError
Construct an exception that holds another exception.
loadForm(int, Tag) - Method in class org.encog.bot.browse.LoadWebPage
Called by loadContents to load a form on the page.
loadFromDirectory(String) - Method in class org.encog.persist.EncogDirectoryPersistence
Load a file from the directory that this object refers to.
loadInput(int, Tag) - Method in class org.encog.bot.browse.LoadWebPage
Called by loadContents to load an input tag on the form.
loadLink(int, Tag) - Method in class org.encog.bot.browse.LoadWebPage
Called by loadContents to load a link on the page.
loadObject(File) - Static method in class org.encog.persist.EncogDirectoryPersistence
Load the specified object.
loadObject(InputStream) - Static method in class org.encog.persist.EncogDirectoryPersistence
Load an object from an input stream.
loadPage(InputStream) - Static method in class org.encog.bot.BotUtil
Load load from the specified input stream.
loadPage(URL) - Static method in class org.encog.bot.BotUtil
Load the specified web page into a string.
loadStandardClassmap() - Static method in class org.encog.util.obj.ReflectionUtil
Load the classmap file.
loadString(String) - Static method in class org.encog.util.ResourceLoader
Load the resource as a string.
loadTitle(int, Tag) - Method in class org.encog.bot.browse.LoadWebPage
Called by loadContents to load the title of the page.
loadToMemory() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Load the binary dataset to memory.
LoadWebPage - Class in org.encog.bot.browse
Called to actually load a web page.
LoadWebPage(URL) - Constructor for class org.encog.bot.browse.LoadWebPage
Construct a web page loader with the specified base URL.
loadWorkload() - Method in class org.encog.neural.prune.PruneIncremental
Get the next workload.
loadWorkload() - Method in class org.encog.util.concurrency.job.ConcurrentJob
Load the subtasks.
log(double) - Static method in class org.encog.mathutil.BoundMath
Calculate the log.
log(int, String) - Static method in class org.encog.util.logging.EncogLogging
 
log(int, Throwable) - Static method in class org.encog.util.logging.EncogLogging
 
log(Throwable) - Static method in class org.encog.util.logging.EncogLogging
 
Logging - Class in org.encog.util.logging
Provides simple logging access to the JDK logging system.
long2Date(long) - Static method in class org.encog.util.time.NumericDateUtil
 
lookAhead(String, boolean) - Method in class org.encog.util.SimpleParser
 
lookup(String) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Lookup the specified field.
lookup(String) - Method in class org.encog.util.arrayutil.NormalizedField
Lookup the specified field.
LOW - Static variable in class org.encog.app.analyst.csv.basic.FileData
The low value.
LUDecomposition - Class in org.encog.mathutil.matrices.decomposition
LU Decomposition.
LUDecomposition(Matrix) - Constructor for class org.encog.mathutil.matrices.decomposition.LUDecomposition
LU Decomposition Structure to access L, U and piv.

M

magnitude(BiPolarNeuralData) - Method in class org.encog.neural.art.ART1
Get the magnitude of the specified input.
makeClass(NormalizationAction, int, int, int, int) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Make the classes based on numbers.
makeClass(NormalizationAction, String[], double, double) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Make the classes using names.
makeClass(NormalizationAction, int, int, int, int) - Method in class org.encog.util.arrayutil.NormalizedField
Make a field to hold a class.
makeClass(NormalizationAction, String[], double, double) - Method in class org.encog.util.arrayutil.NormalizedField
Create a field that will be used to hold a class.
makePassThrough() - Method in class org.encog.app.analyst.script.normalize.AnalystField
Make this a pass-through field.
makePassThrough() - Method in class org.encog.util.arrayutil.NormalizedField
Make this a pass-through field.
makeSparse(MLData) - Method in class org.encog.ml.svm.SVM
Convert regular Encog MLData into the "sparse" data needed by an SVM.
ManhattanFactory - Class in org.encog.ml.factory.train
A factory for Manhattan training.
ManhattanFactory() - Constructor for class org.encog.ml.factory.train.ManhattanFactory
 
ManhattanPropagation - Class in org.encog.neural.networks.training.propagation.manhattan
One problem that the backpropagation technique has is that the magnitude of the partial derivative may be calculated too large or too small.
ManhattanPropagation(ContainsFlat, MLDataSet, double) - Constructor for class org.encog.neural.networks.training.propagation.manhattan.ManhattanPropagation
Construct a Manhattan propagation training object.
mark() - Method in class org.encog.util.SimpleParser
 
MarketLoader - Interface in org.encog.app.quant.loader
Common interface for market loaders.
markGenerated(String) - Method in class org.encog.app.analyst.script.AnalystScript
Mark the sepcified filename as generated.
mate(Chromosome, Chromosome, Chromosome, Chromosome) - Method in interface org.encog.ml.genetic.crossover.Crossover
Mate two chromosomes.
mate(Chromosome, Chromosome, Chromosome, Chromosome) - Method in class org.encog.ml.genetic.crossover.Splice
Assuming this chromosome is the "mother" mate with the passed in "father".
mate(Chromosome, Chromosome, Chromosome, Chromosome) - Method in class org.encog.ml.genetic.crossover.SpliceNoRepeat
Assuming this chromosome is the "mother" mate with the passed in "father".
mate(Genome, Genome, Genome) - Method in class org.encog.ml.genetic.genome.BasicGenome
Mate two genomes.
mate(Genome, Genome, Genome) - Method in interface org.encog.ml.genetic.genome.Genome
Mate with another genome and produce two children.
MateWorker - Class in org.encog.ml.genetic
This class is used in conjunction with a thread pool.
MateWorker(Genome, Genome, Genome, Genome) - Constructor for class org.encog.ml.genetic.MateWorker
 
MathConst - Class in org.encog.mathutil
Math constants needed by Encog.
Matrix - Class in org.encog.mathutil.matrices
This class implements a mathematical matrix.
Matrix(boolean[][]) - Constructor for class org.encog.mathutil.matrices.Matrix
Construct a bipolar matrix from an array of booleans.
Matrix(double[][]) - Constructor for class org.encog.mathutil.matrices.Matrix
Create a matrix from an array of doubles.
Matrix(int, int) - Constructor for class org.encog.mathutil.matrices.Matrix
Create a blank array with the specified number of rows and columns.
MATRIX - Static variable in class org.encog.persist.PersistConst
matrix.
MatrixError - Exception in org.encog.mathutil.matrices
Used by the matrix classes to indicate an error.
MatrixError(String) - Constructor for exception org.encog.mathutil.matrices.MatrixError
Construct this exception with a message.
MatrixError(Throwable) - Constructor for exception org.encog.mathutil.matrices.MatrixError
Construct this exception with another exception.
MatrixMath - Class in org.encog.mathutil.matrices
This class can perform many different mathematical operations on matrixes.
matrixToFlat(double[][], double[], int) - Method in class org.encog.neural.rbf.training.SVDTraining
Convert the matrix to flat.
max(int) - Method in class org.encog.app.quant.util.BarBuffer
Get the max for the specified index.
MAX(double, double) - Static method in class org.encog.neural.rbf.training.SVD
 
max(double[]) - Static method in class org.encog.util.EngineArray
 
MAX_LAYERS - Static variable in class org.encog.ml.factory.method.PNNFactory
The max layer count.
MAX_LAYERS - Static variable in class org.encog.ml.factory.method.RBFNetworkFactory
The max layer count.
MAX_LAYERS - Static variable in class org.encog.ml.factory.method.SRNFactory
The max layer count.
MAX_LAYERS - Static variable in class org.encog.ml.factory.method.SVMFactory
The max layer count.
MAX_LENGTH - Static variable in class org.encog.parse.tags.read.ReadTags
Maximum length string to read.
MAX_MOMENTUM - Static variable in class org.encog.neural.networks.training.strategy.SmartMomentum
The maximum value that momentum can go to.
MAX_PRECIS - Static variable in class org.encog.util.logging.DumpMatrix
Maximum precision.
MAX_RAND - Static variable in class org.encog.mathutil.LinearCongruentialGenerator
The maximum rand number that the standard GCC based LCG will generate.
maxIndex(double[]) - Static method in class org.encog.mathutil.EncogMath
Get the index to the greatest number in a double array.
maxIndex(double[]) - Static method in class org.encog.util.EngineArray
 
maxIndex(int[]) - Static method in class org.encog.util.EngineArray
 
MEMORY_GIG - Static variable in class org.encog.util.Format
Bytes in a GB.
MEMORY_K - Static variable in class org.encog.util.Format
Bytes in a KB.
MEMORY_MEG - Static variable in class org.encog.util.Format
Bytes in a MB.
MEMORY_TERA - Static variable in class org.encog.util.Format
Bytes in a TB.
MemoryDataLoader - Class in org.encog.ml.data.buffer
This class is used, together with a CODEC, load training data from some external file into an Encog memory-based training set.
MemoryDataLoader(DataSetCODEC) - Constructor for class org.encog.ml.data.buffer.MemoryDataLoader
Construct a loader with the specified CODEC.
MexicanHatFunction - Class in org.encog.mathutil.rbf
Multi-dimensional Mexican Hat, or Ricker wavelet, function.
MexicanHatFunction(double, double, double) - Constructor for class org.encog.mathutil.rbf.MexicanHatFunction
Construct a single-dimension Mexican hat function with the specified peak, centers and widths.
MexicanHatFunction(double, double[], double) - Constructor for class org.encog.mathutil.rbf.MexicanHatFunction
Construct a multi-dimension Mexican hat function with the specified peak, centers and widths.
MexicanHatFunction(int) - Constructor for class org.encog.mathutil.rbf.MexicanHatFunction
Create centered at zero, width 0, and peak 0.
MILI_IN_SEC - Static variable in class org.encog.util.Format
How many miliseconds in a second.
MILIS - Static variable in class org.encog.util.benchmark.Evaluate
Mili-seconds in a second.
min(int) - Method in class org.encog.app.quant.util.BarBuffer
Get the min for the specified index.
MIN(int, int) - Static method in class org.encog.neural.rbf.training.SVD
 
min(double[]) - Static method in class org.encog.util.EngineArray
 
MIN_EQ - Static variable in class org.encog.mathutil.Equilateral
The minimum number of fields to use equilateral encoding.
MIN_EQ_CLASSES - Static variable in class org.encog.app.analyst.script.normalize.AnalystField
Minimum classes for encode using equilateral.
MIN_IMPROVEMENT - Static variable in class org.encog.neural.networks.training.strategy.SmartMomentum
The minimum improvement to adjust momentum.
MIN_WORTHWHILE - Static variable in class org.encog.util.concurrency.DetermineWorkload
What is the minimum number of workload entries for a thread to be worthwhile.
minIndex(double[]) - Static method in class org.encog.mathutil.EncogMath
Get the index to the smallest number in a double array.
MINUTE_OFFSET - Static variable in class org.encog.util.time.NumericDateUtil
 
MINUTES_HOUR - Static variable in class org.encog.util.time.TimeSpan
Minutes in an hour.
ML_CONFIG_ARCHITECTURE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "ML:CONFIG_architecture".
ML_CONFIG_EVAL_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "ML:CONFIG_evalFile".
ML_CONFIG_MACHINE_LEARNING_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "ML:CONFIG_machineLearningFile".
ML_CONFIG_OUTPUT_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "ML:CONFIG_outputFile".
ML_CONFIG_TRAINING_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "ML:CONFIG_trainingFile".
ML_CONFIG_TYPE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: = ML:CONFIG_type".
ML_TRAIN_ARGUMENTS - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "ML:TRAIN_arguments".
ML_TRAIN_CROSS - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "ML:TRAIN_cross".
ML_TRAIN_TARGET_ERROR - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "ML:TRAIN_targetError".
ML_TRAIN_TYPE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "ML:TRAIN_type".
MLAutoAssocation - Interface in org.encog.ml
Defines a MLMethod that can handle autoassocation.
MLClassification - Interface in org.encog.ml
This interface defines a MLMethod that is used for classification.
MLCluster - Interface in org.encog.ml
Defines a cluster.
MLClustering - Interface in org.encog.ml
A machine learning method that is used to break data into clusters.
MLContext - Interface in org.encog.ml
Defines a MLMethod that can hold context.
MLData - Interface in org.encog.ml.data
Defines an array of data.
MLDataPair - Interface in org.encog.ml.data
Training data is stored in two ways, depending on if the data is for supervised, or unsupervised training.
MLDataSet - Interface in org.encog.ml.data
An interface designed to abstract classes that store machine learning data.
MLEncodable - Interface in org.encog.ml
Defines a Machine Learning Method that can be encoded to a double array.
MLError - Interface in org.encog.ml
Defines Machine Learning Method that can calculate an error based on a data set.
MLInput - Interface in org.encog.ml
Defines a MLMethod that accepts input.
MLInputOutput - Interface in org.encog.ml
This is a convenience interface that combines MLInput and MLOutput.
MLlDataError - Exception in org.encog.ml.data
Used by the machine learning methods classes to indicate a data error.
MLlDataError(String) - Constructor for exception org.encog.ml.data.MLlDataError
Construct a message exception.
MLlDataError(Throwable) - Constructor for exception org.encog.ml.data.MLlDataError
Construct an exception that holds another exception.
MLMethod - Interface in org.encog.ml
This interface is the base for all Encog Machine Learning methods.
MLMethodFactory - Class in org.encog.ml.factory
This factory is used to create machine learning methods.
MLMethodFactory() - Constructor for class org.encog.ml.factory.MLMethodFactory
 
MLOutput - Interface in org.encog.ml
Defines a MLMethod that produces output.
MLProperties - Interface in org.encog.ml
Defines a Machine Learning Method that holds properties.
MLRegression - Interface in org.encog.ml
Defines a Machine Learning Method that supports regression.
MLResettable - Interface in org.encog.ml
Defines a Machine Learning Method that can be reset to an untrained starting point.
MLTrain - Interface in org.encog.ml.train
Defines a training method for a machine learning method.
MLTrainFactory - Class in org.encog.ml.factory
This factory is used to create trainers for machine learning methods.
MLTrainFactory() - Constructor for class org.encog.ml.factory.MLTrainFactory
 
Momentum - Interface in org.encog.neural.networks.training
Specifies that a training algorithm has the concept of a momentum.
MOMENTUM_CYCLES - Static variable in class org.encog.neural.networks.training.strategy.SmartMomentum
How many cycles to accept before adjusting momentum.
MOMENTUM_INCREASE - Static variable in class org.encog.neural.networks.training.strategy.SmartMomentum
How much to increase momentum by.
MONTH_OFFSET - Static variable in class org.encog.util.time.NumericDateUtil
 
MONTHS_YEAR - Static variable in class org.encog.util.time.TimeSpan
Months in a year.
MovingAverage - Class in org.encog.app.quant.indicators
A simple moving average.
MovingAverage(int, boolean) - Constructor for class org.encog.app.quant.indicators.MovingAverage
Construct this object.
multiply(double) - Method in class org.encog.mathutil.matrices.Matrix
Multiply every value in the matrix by the specified value.
multiply(double[], double[]) - Method in class org.encog.mathutil.matrices.Matrix
Multiply every row by the specified vector.
multiply(Matrix, double) - Static method in class org.encog.mathutil.matrices.MatrixMath
Return the result of multiplying every cell in the matrix by the specified value.
multiply(Matrix, Matrix) - Static method in class org.encog.mathutil.matrices.MatrixMath
Return the product of the first and second matrix.
MultiquadricFunction - Class in org.encog.mathutil.rbf
Multi-dimensional Multiquadric function.
MultiquadricFunction(double, double, double) - Constructor for class org.encog.mathutil.rbf.MultiquadricFunction
Construct a single-dimension Multiquadric function with the specified peak, centers and widths.
MultiquadricFunction(double, double[], double) - Constructor for class org.encog.mathutil.rbf.MultiquadricFunction
Construct a multi-dimension Multiquadric function with the specified peak, centers and widths.
MultiquadricFunction(int) - Constructor for class org.encog.mathutil.rbf.MultiquadricFunction
Create centered at zero, width 0, and peak 0.
MUST_USE_IMAGE - Static variable in class org.encog.ml.data.image.ImageNeuralDataSet
Error message to inform the caller that only ImageNeuralData objects can be used with this collection.
Mutate - Interface in org.encog.ml.genetic.mutate
Defines how a chromosome is mutated.
mutateActivationResponse(double, double) - Method in class org.encog.neural.neat.training.NEATGenome
Mutate the activation response.
MutatePerturb - Class in org.encog.ml.genetic.mutate
A simple mutation based on random numbers.
MutatePerturb(double) - Constructor for class org.encog.ml.genetic.mutate.MutatePerturb
Construct a perturb mutation.
MutateShuffle - Class in org.encog.ml.genetic.mutate
A simple mutation where genes are shuffled.
MutateShuffle() - Constructor for class org.encog.ml.genetic.mutate.MutateShuffle
 
mutateWeights(double, double, double) - Method in class org.encog.neural.neat.training.NEATGenome
Mutate the weights.

N

NAME - Static variable in class org.encog.app.quant.indicators.MovingAverage
The name of this indicator.
NAME - Static variable in class org.encog.app.quant.indicators.predictive.BestClose
The name of this indicator.
NAME - Static variable in class org.encog.app.quant.indicators.predictive.BestReturn
The name of this indicator.
NAME - Static variable in class org.encog.persist.PersistConst
A name.
NATIVE - Static variable in class org.encog.persist.PersistConst
Native.
navigate(Form) - Method in class org.encog.bot.browse.Browser
Navigate to the specified form by performing a submit of that form.
navigate(Form, Input) - Method in class org.encog.bot.browse.Browser
Navigate based on a form.
navigate(Link) - Method in class org.encog.bot.browse.Browser
Navigate to a new page based on a link.
navigate(String) - Method in class org.encog.bot.browse.Browser
Navigate based on a string URL.
navigate(URL) - Method in class org.encog.bot.browse.Browser
Navigate to a page based on a URL object.
navigate(URL, InputStream) - Method in class org.encog.bot.browse.Browser
Navigate to a page and post the specified data.
NEATGenome - Class in org.encog.neural.neat.training
Implements a NEAT genome.
NEATGenome(NEATGenome) - Constructor for class org.encog.neural.neat.training.NEATGenome
Construct a genome by copying another.
NEATGenome(long, Chromosome, Chromosome, int, int) - Constructor for class org.encog.neural.neat.training.NEATGenome
Create a NEAT gnome.
NEATGenome(long, int, int) - Constructor for class org.encog.neural.neat.training.NEATGenome
Construct a genome, do not provide links and neurons.
NEATGenome() - Constructor for class org.encog.neural.neat.training.NEATGenome
 
NEATInnovation - Class in org.encog.neural.neat.training
Implements a NEAT innovation.
NEATInnovation() - Constructor for class org.encog.neural.neat.training.NEATInnovation
Default constructor, used mainly for persistence.
NEATInnovation(long, long, NEATInnovationType, long) - Constructor for class org.encog.neural.neat.training.NEATInnovation
Construct an innovation.
NEATInnovation(long, long, NEATInnovationType, long, NEATNeuronType, double, double) - Constructor for class org.encog.neural.neat.training.NEATInnovation
Construct an innovation.
NEATInnovation(NEATNeuronGene, long, long) - Constructor for class org.encog.neural.neat.training.NEATInnovation
Construct an innovation.
NEATInnovationList - Class in org.encog.neural.neat.training
Implements a NEAT innovation list.
NEATInnovationList() - Constructor for class org.encog.neural.neat.training.NEATInnovationList
The default constructor, used mainly for persistance.
NEATInnovationList(Population, Chromosome, Chromosome) - Constructor for class org.encog.neural.neat.training.NEATInnovationList
Construct an innovation list.
NEATInnovationType - Enum in org.encog.neural.neat.training
The type of NEAT innovation.
NEATLink - Class in org.encog.neural.neat
Implements a link between two NEAT neurons.
NEATLink() - Constructor for class org.encog.neural.neat.NEATLink
Default constructor, used mainly for persistance.
NEATLink(double, NEATNeuron, NEATNeuron, boolean) - Constructor for class org.encog.neural.neat.NEATLink
Construct a NEAT link.
NEATLinkGene - Class in org.encog.neural.neat.training
Implements a NEAT link gene.
NEATLinkGene() - Constructor for class org.encog.neural.neat.training.NEATLinkGene
Default constructor, used mainly for persistence.
NEATLinkGene(long, long, boolean, long, double, boolean) - Constructor for class org.encog.neural.neat.training.NEATLinkGene
Construct a NEAT link gene.
NEATNetwork - Class in org.encog.neural.neat
Implements a NEAT network as a synapse between two layers.
NEATNetwork() - Constructor for class org.encog.neural.neat.NEATNetwork
Default constructor.
NEATNetwork(int, int, List<NEATNeuron>, ActivationFunction, ActivationFunction, int) - Constructor for class org.encog.neural.neat.NEATNetwork
Construct a NEAT synapse.
NEATNetwork(int, int) - Constructor for class org.encog.neural.neat.NEATNetwork
Construct a NEAT network.
NEATNeuron - Class in org.encog.neural.neat
Implements a NEAT neuron.
NEATNeuron() - Constructor for class org.encog.neural.neat.NEATNeuron
Default constructor, used for persistance.
NEATNeuron(NEATNeuronType, long, double, double, double) - Constructor for class org.encog.neural.neat.NEATNeuron
Construct a NEAT neuron.
NEATNeuronGene - Class in org.encog.neural.neat.training
Implements a NEAT neuron gene.
NEATNeuronGene() - Constructor for class org.encog.neural.neat.training.NEATNeuronGene
The default constructor.
NEATNeuronGene(NEATNeuronType, long, double, double) - Constructor for class org.encog.neural.neat.training.NEATNeuronGene
Construct a gene.
NEATNeuronGene(NEATNeuronType, long, double, double, boolean, double) - Constructor for class org.encog.neural.neat.training.NEATNeuronGene
Construct a neuron gene.
NEATNeuronType - Enum in org.encog.neural.neat
The types of neurons supported by NEAT.
NEATPopulation - Class in org.encog.neural.neat
 
NEATPopulation(int, int, int) - Constructor for class org.encog.neural.neat.NEATPopulation
Construct a starting NEAT population.
NEATPopulation() - Constructor for class org.encog.neural.neat.NEATPopulation
 
NEATTraining - Class in org.encog.neural.neat.training
Implements NEAT genetic training.
NEATTraining(CalculateScore, int, int, int) - Constructor for class org.encog.neural.neat.training.NEATTraining
Construct a neat trainer with a new population.
NEATTraining(CalculateScore, Population) - Constructor for class org.encog.neural.neat.training.NEATTraining
Construct neat training with an existing population.
NEGATIVE_ETA - Static variable in class org.encog.neural.flat.train.prop.RPROPConst
The NEGATIVE ETA value.
NeighborhoodBubble - Class in org.encog.neural.som.training.basic.neighborhood
A neighborhood function that uses a simple bubble.
NeighborhoodBubble(int) - Constructor for class org.encog.neural.som.training.basic.neighborhood.NeighborhoodBubble
Create a bubble neighborhood function that will return 1.0 (full update) for any neuron that is plus or minus the width distance from the winning neuron.
NeighborhoodFunction - Interface in org.encog.neural.som.training.basic.neighborhood
Defines how a neighborhood function should work in competitive training.
NeighborhoodRBF - Class in org.encog.neural.som.training.basic.neighborhood
Implements a multi-dimensional RBF neighborhood function.
NeighborhoodRBF(RBFEnum, int, int) - Constructor for class org.encog.neural.som.training.basic.neighborhood.NeighborhoodRBF
Construct a 2d neighborhood function based on the sizes for the x and y dimensions.
NeighborhoodRBF(int[], RBFEnum) - Constructor for class org.encog.neural.som.training.basic.neighborhood.NeighborhoodRBF
Construct a multi-dimensional neighborhood function.
NeighborhoodRBF1D - Class in org.encog.neural.som.training.basic.neighborhood
A neighborhood function based on an RBF function.
NeighborhoodRBF1D(RadialBasisFunction) - Constructor for class org.encog.neural.som.training.basic.neighborhood.NeighborhoodRBF1D
Construct the neighborhood function with the specified radial function.
NeighborhoodRBF1D(RBFEnum) - Constructor for class org.encog.neural.som.training.basic.neighborhood.NeighborhoodRBF1D
Construct a 1d neighborhood function.
NeighborhoodSingle - Class in org.encog.neural.som.training.basic.neighborhood
A very simple neighborhood function that will return 1.0 (full effect) for the winning neuron, and 0.0 (no change) for everything else.
NeighborhoodSingle() - Constructor for class org.encog.neural.som.training.basic.neighborhood.NeighborhoodSingle
 
NeighborhoodSOMFactory - Class in org.encog.ml.factory.train
Train an SOM network with a neighborhood method.
NeighborhoodSOMFactory() - Constructor for class org.encog.ml.factory.train.NeighborhoodSOMFactory
 
network - Variable in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
The network to train.
NetworkCODEC - Class in org.encog.neural.networks.structure
This class will extract the "long term memory" of a neural network, that is the weights and bias values into an array.
NetworkFold - Class in org.encog.neural.networks.training.cross
The network for one fold of a cross validation.
NetworkFold(FlatNetwork) - Constructor for class org.encog.neural.networks.training.cross.NetworkFold
Construct a fold from the specified flat network.
NetworkPattern - Enum in org.encog.neural.prune
Specify which network pattern to use.
networkSize(MLMethod) - Static method in class org.encog.neural.networks.structure.NetworkCODEC
Determine the network size.
networkToArray(MLMethod) - Static method in class org.encog.neural.networks.structure.NetworkCODEC
Convert to an array.
networkToString(BasicNetwork) - Static method in class org.encog.neural.prune.PruneIncremental
Format the network as a human readable string that lists the hidden layers.
NeuralData - Interface in org.encog.neural.data
This is an alias class for Encog 2.5 compatibility.
NeuralDataMapping - Class in org.encog.neural.networks
Used to map one neural data object to another.
NeuralDataMapping() - Constructor for class org.encog.neural.networks.NeuralDataMapping
Construct the neural data mapping class, with null values.
NeuralDataMapping(MLData, MLData) - Constructor for class org.encog.neural.networks.NeuralDataMapping
Construct the neural data mapping class with the specified values.
NeuralDataPair - Interface in org.encog.neural.data
This is an alias class for Encog 2.5 compatibility.
NeuralDataSet - Interface in org.encog.neural.data
This is an alias class for Encog 2.5 compatibility.
NeuralDataSetCODEC - Class in org.encog.ml.data.buffer.codec
A CODEC that works with the NeuralDataSet class.
NeuralDataSetCODEC(MLDataSet) - Constructor for class org.encog.ml.data.buffer.codec.NeuralDataSetCODEC
Construct a CODEC.
NeuralGeneticAlgorithm - Class in org.encog.neural.networks.training.genetic
Implements a genetic algorithm that allows a feedforward or simple recurrent neural network to be trained using a genetic algorithm.
NeuralGeneticAlgorithm(BasicNetwork, Randomizer, CalculateScore, int, double, double) - Constructor for class org.encog.neural.networks.training.genetic.NeuralGeneticAlgorithm
Construct a neural genetic algorithm.
NeuralGeneticAlgorithm.NeuralGeneticAlgorithmHelper - Class in org.encog.neural.networks.training.genetic
Very simple class that implements a genetic algorithm.
NeuralGeneticAlgorithm.NeuralGeneticAlgorithmHelper() - Constructor for class org.encog.neural.networks.training.genetic.NeuralGeneticAlgorithm.NeuralGeneticAlgorithmHelper
 
NeuralGenome - Class in org.encog.neural.networks.training.genetic
Implements a genome that allows a feedforward neural network to be trained using a genetic algorithm.
NeuralGenome(BasicNetwork) - Constructor for class org.encog.neural.networks.training.genetic.NeuralGenome
Construct a neural genome.
NeuralNetworkError - Exception in org.encog.neural
Used by the neural network classes to indicate an error.
NeuralNetworkError(String) - Constructor for exception org.encog.neural.NeuralNetworkError
Construct a message exception.
NeuralNetworkError(Throwable) - Constructor for exception org.encog.neural.NeuralNetworkError
Construct an exception that holds another exception.
NeuralNetworkError(String, Throwable) - Constructor for exception org.encog.neural.NeuralNetworkError
Construct an exception that holds another exception.
NeuralNetworkPattern - Interface in org.encog.neural.pattern
Patterns are used to create common sorts of neural networks.
NeuralSimulatedAnnealing - Class in org.encog.neural.networks.training.anneal
This class implements a simulated annealing training algorithm for neural networks.
NeuralSimulatedAnnealing(BasicNetwork, CalculateScore, double, double, int) - Constructor for class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealing
Construct a simulated annleaing trainer for a feedforward neural network.
NeuralSimulatedAnnealingHelper - Class in org.encog.neural.networks.training.anneal
Simple class used by the neural simulated annealing.
NeuralSimulatedAnnealingHelper(NeuralSimulatedAnnealing) - Constructor for class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealingHelper
Constructs this object.
NeuralStructure - Class in org.encog.neural.networks.structure
Holds "cached" information about the structure of the neural network.
NeuralStructure(BasicNetwork) - Constructor for class org.encog.neural.networks.structure.NeuralStructure
Construct a structure object for the specified network.
NEURON_COUNT - Static variable in class org.encog.persist.PersistConst
Neurons.
NEURON_ID - Static variable in class org.encog.neural.neat.NEATNeuron
 
NEURONS - Static variable in class org.encog.persist.PersistConst
Neuron count.
neuronType2String(NEATNeuronType) - Static method in class org.encog.neural.neat.NEATNeuron
 
neuronTypeToString(NEATNeuronType) - Static method in class org.encog.neural.neat.PersistNEATPopulation
 
next() - Method in class org.encog.ml.data.basic.BasicMLDataSet.BasicMLIterator
next() - Method in class org.encog.ml.data.buffer.BufferedDataSetIterator
next() - Method in class org.encog.ml.data.folded.FoldedIterator
next() - Method in class org.encog.util.csv.ReadCSV
Read the next line.
nextDouble() - Method in class org.encog.mathutil.LinearCongruentialGenerator
 
nextDouble() - Method in class org.encog.mathutil.randomize.BasicRandomizer
 
nextDouble(double, double) - Method in class org.encog.mathutil.randomize.BasicRandomizer
Generate a random number in the specified range.
nextLong() - Method in class org.encog.mathutil.LinearCongruentialGenerator
 
NguyenWidrowRandomizer - Class in org.encog.mathutil.randomize
Implementation of Nguyen-Widrow weight initialization.
NguyenWidrowRandomizer(double, double) - Constructor for class org.encog.mathutil.randomize.NguyenWidrowRandomizer
Construct a Nguyen-Widrow randomizer.
NinjaFileConvert - Class in org.encog.app.quant.ninja
A simple class to convert financial data files into the format used by NinjaTrader for input.
NinjaFileConvert() - Constructor for class org.encog.app.quant.ninja.NinjaFileConvert
 
NinjaStreamWriter - Class in org.encog.app.quant.ninja
Can be used from within NinjaTrader to export data.
NinjaStreamWriter() - Constructor for class org.encog.app.quant.ninja.NinjaStreamWriter
Construct the object, and set the defaults.
NO_BIAS_ACTIVATION - Static variable in class org.encog.neural.flat.FlatNetwork
The value that indicates that there is no bias activation.
norm2() - Method in class org.encog.mathutil.matrices.decomposition.SingularValueDecomposition
Two norm
NormalizationAction - Enum in org.encog.util.arrayutil
Normalization actions desired.
normalize(File) - Method in class org.encog.app.analyst.csv.normalize.AnalystNormalizeCSV
Normalize the input file.
normalize(double) - Method in class org.encog.app.analyst.script.normalize.AnalystField
Normalize the specified value.
normalize(double) - Method in class org.encog.util.arrayutil.NormalizedField
Normalize the specified value.
NORMALIZE_CONFIG_SOURCE_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "NORMALIZE:CONFIG_sourceFile".
NORMALIZE_CONFIG_TARGET_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "NORMALIZE:CONFIG_targetFile".
NormalizeArray - Class in org.encog.util.arrayutil
Normalization is the process where data is adjusted to be inside a range.
NormalizeArray() - Constructor for class org.encog.util.arrayutil.NormalizeArray
Construct the object, default NormalizedHigh and NormalizedLow to 1 and -1.
normalizeBinary(double) - Static method in class org.encog.mathutil.matrices.BiPolarUtil
Normalize a binary number.
NormalizedField - Class in org.encog.util.arrayutil
This object holds the normalization stats for a column.
NormalizedField() - Constructor for class org.encog.util.arrayutil.NormalizedField
Construct the object with a range of 1 and -1.
NormalizedField(double, double) - Constructor for class org.encog.util.arrayutil.NormalizedField
Construct the object.
NormalizedField(NormalizationAction, String) - Constructor for class org.encog.util.arrayutil.NormalizedField
Construct an object.
NormalizedField(NormalizationAction, String, double, double, double, double) - Constructor for class org.encog.util.arrayutil.NormalizedField
Construct the field, with no defaults.
NormalizedField(String, NormalizationAction, double, double) - Constructor for class org.encog.util.arrayutil.NormalizedField
Construct the object.
NormalizeRange - Enum in org.encog.app.analyst.wizard
The normalization range that the Encog Analyst Wizard should use.
nr_class - Variable in class org.encog.mathutil.libsvm.svm_model
 
nr_weight - Variable in class org.encog.mathutil.libsvm.svm_parameter
 
nSV - Variable in class org.encog.mathutil.libsvm.svm_model
 
nu - Variable in class org.encog.mathutil.libsvm.svm_parameter
 
NU_SVC - Static variable in class org.encog.mathutil.libsvm.svm_parameter
 
NU_SVR - Static variable in class org.encog.mathutil.libsvm.svm_parameter
 
NullStatusReportable - Class in org.encog
A report object that does nothing.
NullStatusReportable() - Constructor for class org.encog.NullStatusReportable
 
NumberList - Class in org.encog.util.csv
Class used to handle lists of numbers.
numClusters() - Method in class org.encog.ml.kmeans.KMeansClustering
 
numClusters() - Method in interface org.encog.ml.MLClustering
 
NumericDateUtil - Class in org.encog.util.time
 
NumericDateUtil() - Constructor for class org.encog.util.time.NumericDateUtil
 
NumericRange - Class in org.encog.mathutil
A numeric range has a high, low, mean, root-mean-square, standard deviation, and the count of how many samples it contains.
NumericRange(List<Double>) - Constructor for class org.encog.mathutil.NumericRange
Create a numeric range from a list of values.

O

ObjectCloner - Class in org.encog.util.obj
A simple Object cloner that uses serialization.
ObjectPair<A,B> - Class in org.encog.util
A pair of objects.
ObjectPair(A, B) - Constructor for class org.encog.util.ObjectPair
Construct an object pair.
objectToDouble(Double[]) - Static method in class org.encog.util.EngineArray
Convert an array of Double objects to double primitives.
ONE_CLASS - Static variable in class org.encog.mathutil.libsvm.svm_parameter
 
OPEN - Static variable in class org.encog.app.analyst.csv.basic.FileData
The open value.
open(String, boolean, CSVFormat) - Method in class org.encog.app.quant.ninja.NinjaStreamWriter
Open the file for output.
open() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Open the binary file for reading.
open() - Method in class org.encog.ml.data.buffer.EncogEGBFile
OPen an existing EGB file.
openAdditional() - Method in class org.encog.ml.data.basic.BasicMLDataSet
Opens an additional instance of this dataset.
openAdditional() - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
 
openAdditional() - Method in class org.encog.ml.data.folded.FoldedDataSet
Opens an additional instance of this dataset.
openAdditional() - Method in interface org.encog.ml.data.MLDataSet
Opens an additional instance of this dataset.
openResourceInputStream(String) - Static method in class org.encog.util.file.ResourceInputStream
Construct a location to read from the specified resource.
org.encog - package org.encog
 
org.encog.app.analyst - package org.encog.app.analyst
This package contains the Encog Analyst.
org.encog.app.analyst.analyze - package org.encog.app.analyst.analyze
This package contains all if the classes used to analyze data for the analyst.
org.encog.app.analyst.commands - package org.encog.app.analyst.commands
This package contains all of the analyst commands.
org.encog.app.analyst.csv - package org.encog.app.analyst.csv
This package contains all of the classes for directly working with CSV files, used by the analyst.
org.encog.app.analyst.csv.balance - package org.encog.app.analyst.csv.balance
This package contains the classes used to balance CSV files.
org.encog.app.analyst.csv.basic - package org.encog.app.analyst.csv.basic
This package contains the basic subclasses for all of the CSV handling done by the Encog analyst.
org.encog.app.analyst.csv.filter - package org.encog.app.analyst.csv.filter
This package contains all of the classes used by the analyst to filter.
org.encog.app.analyst.csv.normalize - package org.encog.app.analyst.csv.normalize
This package contains all of the classes used by the analyst to normalize.
org.encog.app.analyst.csv.segregate - package org.encog.app.analyst.csv.segregate
This package contains all of the classes used to segregate, by the analyst.
org.encog.app.analyst.csv.shuffle - package org.encog.app.analyst.csv.shuffle
This package contains all of the classes used by the analyst to shuffle.
org.encog.app.analyst.csv.sort - package org.encog.app.analyst.csv.sort
This package contains all of the classes used by the analyst to sort.
org.encog.app.analyst.report - package org.encog.app.analyst.report
This package contains the classes used to produce a simple report about the analyst file.
org.encog.app.analyst.script - package org.encog.app.analyst.script
 
org.encog.app.analyst.script.normalize - package org.encog.app.analyst.script.normalize
This package contains the classes used to store information about normalization for the script.
org.encog.app.analyst.script.prop - package org.encog.app.analyst.script.prop
This package contains all of the property classes for the script.
org.encog.app.analyst.script.segregate - package org.encog.app.analyst.script.segregate
This package contains all of the classes to store information about how to segregate for the script.
org.encog.app.analyst.script.task - package org.encog.app.analyst.script.task
This package contains classes that store the tasks for a script.
org.encog.app.analyst.util - package org.encog.app.analyst.util
This package contains basic utilities for the Encog analyst.
org.encog.app.analyst.wizard - package org.encog.app.analyst.wizard
This package contains classes used by the Encog Analyst Wizard.
org.encog.app.quant - package org.encog.app.quant
This package contains the Encog Quant application.
org.encog.app.quant.indicators - package org.encog.app.quant.indicators
This package contains indicators used by Encog.
org.encog.app.quant.indicators.predictive - package org.encog.app.quant.indicators.predictive
This package contains predictive indicators used by Encog.
org.encog.app.quant.loader - package org.encog.app.quant.loader
This package contains the loader, used to load financial data.
org.encog.app.quant.loader.yahoo - package org.encog.app.quant.loader.yahoo
This package contains the Yahoo Finance loader.
org.encog.app.quant.ninja - package org.encog.app.quant.ninja
This package contains the Ninjatrader package.
org.encog.app.quant.util - package org.encog.app.quant.util
This package contains utilities used by the Encog quant app.
org.encog.bot - package org.encog.bot
This package contains all of the classes and packages for Encog's bot functions.
org.encog.bot.browse - package org.encog.bot.browse
This class contains Encog's browser functions.
org.encog.bot.browse.range - package org.encog.bot.browse.range
This package contains all of the classes that represent ranges in an HTML document.
org.encog.bot.dataunit - package org.encog.bot.dataunit
This package contains all of the data units for Encog's browser.
org.encog.bot.rss - package org.encog.bot.rss
This package contains all of the classes used for Encog's RSS functions.
org.encog.engine.network.activation - package org.encog.engine.network.activation
This package contains all of the classes for activation functions.
org.encog.mathutil - package org.encog.mathutil
 
org.encog.mathutil.error - package org.encog.mathutil.error
 
org.encog.mathutil.libsvm - package org.encog.mathutil.libsvm
 
org.encog.mathutil.matrices - package org.encog.mathutil.matrices
 
org.encog.mathutil.matrices.decomposition - package org.encog.mathutil.matrices.decomposition
 
org.encog.mathutil.randomize - package org.encog.mathutil.randomize
 
org.encog.mathutil.rbf - package org.encog.mathutil.rbf
 
org.encog.ml - package org.encog.ml
This package contains all of the classes for Machine Learning.
org.encog.ml.anneal - package org.encog.ml.anneal
THis package contains the classes for simulated annealing.
org.encog.ml.data - package org.encog.ml.data
This package contains classes to provide data to the Machine Learning Methods.
org.encog.ml.data.basic - package org.encog.ml.data.basic
 
org.encog.ml.data.buffer - package org.encog.ml.data.buffer
This package implements a folded data set.
org.encog.ml.data.buffer.codec - package org.encog.ml.data.buffer.codec
This package contains classes used to encode/decode from the EGB format.
org.encog.ml.data.folded - package org.encog.ml.data.folded
This package implements a folded data set.
org.encog.ml.data.image - package org.encog.ml.data.image
This package contains classes used to allow images to be Machine Learning Data.
org.encog.ml.data.specific - package org.encog.ml.data.specific
This package contains data classes to get data from specific locations.
org.encog.ml.factory - package org.encog.ml.factory
This package contains the Encog Machine Learning Factory.
org.encog.ml.factory.method - package org.encog.ml.factory.method
 
org.encog.ml.factory.parse - package org.encog.ml.factory.parse
 
org.encog.ml.factory.train - package org.encog.ml.factory.train
This package is used to create trainers.
org.encog.ml.genetic - package org.encog.ml.genetic
This package is used to hold the classes used to implement genetic algorithms for Encog.
org.encog.ml.genetic.crossover - package org.encog.ml.genetic.crossover
This package is used for Encog Genetic Algorithms.
org.encog.ml.genetic.genes - package org.encog.ml.genetic.genes
This package is used for Encog Genetic Algorithms.
org.encog.ml.genetic.genome - package org.encog.ml.genetic.genome
This package is used for Encog Genetic Algorithms.
org.encog.ml.genetic.innovation - package org.encog.ml.genetic.innovation
This package is used for Encog Genetic Algorithms.
org.encog.ml.genetic.mutate - package org.encog.ml.genetic.mutate
This package is used for Encog Genetic Algorithms.
org.encog.ml.genetic.population - package org.encog.ml.genetic.population
This package is used for Encog Genetic Algorithms.
org.encog.ml.genetic.selection - package org.encog.ml.genetic.selection
This package is used for Encog Genetic Algorithms.
org.encog.ml.genetic.species - package org.encog.ml.genetic.species
This package is used for Encog Genetic Algorithms.
org.encog.ml.kmeans - package org.encog.ml.kmeans
This package holds the classes used to implement kmeans clustering.
org.encog.ml.svm - package org.encog.ml.svm
This package contains all of the classes for support vector machines.
org.encog.ml.svm.training - package org.encog.ml.svm.training
This package holds the classes used for SVM training.
org.encog.ml.train - package org.encog.ml.train
 
org.encog.ml.train.strategy - package org.encog.ml.train.strategy
 
org.encog.ml.train.strategy.end - package org.encog.ml.train.strategy.end
 
org.encog.neural - package org.encog.neural
 
org.encog.neural.art - package org.encog.neural.art
This package contains the classes for ART neural networks.
org.encog.neural.bam - package org.encog.neural.bam
THis package contains the classes for BAM networks.
org.encog.neural.cpn - package org.encog.neural.cpn
This package contains the classes for CPN networks.
org.encog.neural.cpn.training - package org.encog.neural.cpn.training
This package contains the instar and outstar training for the network.
org.encog.neural.data - package org.encog.neural.data
This package contains compatibility classes to ease the transition to Encog 3.0.
org.encog.neural.data.basic - package org.encog.neural.data.basic
This package contains compatibility classes to ease the transition to Encog 3.0.
org.encog.neural.flat - package org.encog.neural.flat
Flat neural networks are Encog's higher performance implementation of multi-layer networks.
org.encog.neural.flat.train - package org.encog.neural.flat.train
This package contains the flat training methods.
org.encog.neural.flat.train.gradient - package org.encog.neural.flat.train.gradient
 
org.encog.neural.flat.train.prop - package org.encog.neural.flat.train.prop
This package contains the propagation training for flat networks.
org.encog.neural.neat - package org.encog.neural.neat
 
org.encog.neural.neat.training - package org.encog.neural.neat.training
 
org.encog.neural.networks - package org.encog.neural.networks
This package contains the neural network machine learning methods.
org.encog.neural.networks.layers - package org.encog.neural.networks.layers
 
org.encog.neural.networks.structure - package org.encog.neural.networks.structure
This package contains classes used to handle the structure of a neural network.
org.encog.neural.networks.training - package org.encog.neural.networks.training
This package provides training for neural networks.
org.encog.neural.networks.training.anneal - package org.encog.neural.networks.training.anneal
This package trains neural network using simulated annealing.
org.encog.neural.networks.training.concurrent - package org.encog.neural.networks.training.concurrent
This package allows concurrent training jobs to be scheduled.
org.encog.neural.networks.training.concurrent.jobs - package org.encog.neural.networks.training.concurrent.jobs
This package provides the performers to perform concurrent training jobs.
org.encog.neural.networks.training.concurrent.performers - package org.encog.neural.networks.training.concurrent.performers
This package defines jobs for concurrent training.
org.encog.neural.networks.training.cross - package org.encog.neural.networks.training.cross
This package provides cross validation training.
org.encog.neural.networks.training.genetic - package org.encog.neural.networks.training.genetic
This package provides genetic training for neural networks.
org.encog.neural.networks.training.lma - package org.encog.neural.networks.training.lma
This package provides Levenberg Marquardt training for neural networks.
org.encog.neural.networks.training.pnn - package org.encog.neural.networks.training.pnn
This package provides PNN training.
org.encog.neural.networks.training.propagation - package org.encog.neural.networks.training.propagation
This package provides propagation training for neural networks.
org.encog.neural.networks.training.propagation.back - package org.encog.neural.networks.training.propagation.back
This package provides back propagation training for neural networks.
org.encog.neural.networks.training.propagation.manhattan - package org.encog.neural.networks.training.propagation.manhattan
This package provides Manhattan propagation training for neural networks.
org.encog.neural.networks.training.propagation.resilient - package org.encog.neural.networks.training.propagation.resilient
This package provides resilient propagation training for neural networks.
org.encog.neural.networks.training.propagation.scg - package org.encog.neural.networks.training.propagation.scg
This package provides SCG propagation training for neural networks.
org.encog.neural.networks.training.simple - package org.encog.neural.networks.training.simple
This package provides simple ADALINE training.
org.encog.neural.networks.training.strategy - package org.encog.neural.networks.training.strategy
This package provides training strategies to update learning date and momentum.
org.encog.neural.pattern - package org.encog.neural.pattern
This package contains many helper classes to create neural network types.
org.encog.neural.pnn - package org.encog.neural.pnn
This package contains the classes for the PNN.
org.encog.neural.prune - package org.encog.neural.prune
This package contains the classes to prune a neural network.
org.encog.neural.rbf - package org.encog.neural.rbf
This package contains classes for RBF networks.
org.encog.neural.rbf.training - package org.encog.neural.rbf.training
This package contains a SVD trainer for RBF.
org.encog.neural.som - package org.encog.neural.som
This package contains classes for the SOM.
org.encog.neural.som.training - package org.encog.neural.som.training
This package contains training methods for the SOM.
org.encog.neural.som.training.basic - package org.encog.neural.som.training.basic
This package implements neighborhood training for the SOM.
org.encog.neural.som.training.basic.neighborhood - package org.encog.neural.som.training.basic.neighborhood
This package provides neighborhood functions for the SOM.
org.encog.neural.som.training.clustercopy - package org.encog.neural.som.training.clustercopy
This package provides a very simple trianing method for SOM's.
org.encog.neural.thermal - package org.encog.neural.thermal
This package implements thermal neural networks, such as Hopfield and Boltzmann machines.
org.encog.parse - package org.encog.parse
 
org.encog.parse.tags - package org.encog.parse.tags
 
org.encog.parse.tags.read - package org.encog.parse.tags.read
 
org.encog.parse.tags.write - package org.encog.parse.tags.write
 
org.encog.persist - package org.encog.persist
 
org.encog.plugin - package org.encog.plugin
 
org.encog.util - package org.encog.util
 
org.encog.util.arrayutil - package org.encog.util.arrayutil
 
org.encog.util.benchmark - package org.encog.util.benchmark
 
org.encog.util.concurrency - package org.encog.util.concurrency
 
org.encog.util.concurrency.job - package org.encog.util.concurrency.job
 
org.encog.util.csv - package org.encog.util.csv
 
org.encog.util.downsample - package org.encog.util.downsample
 
org.encog.util.error - package org.encog.util.error
 
org.encog.util.file - package org.encog.util.file
 
org.encog.util.http - package org.encog.util.http
 
org.encog.util.identity - package org.encog.util.identity
 
org.encog.util.logging - package org.encog.util.logging
 
org.encog.util.obj - package org.encog.util.obj
 
org.encog.util.simple - package org.encog.util.simple
 
org.encog.util.time - package org.encog.util.time
 
org.encog.util.validate - package org.encog.util.validate
 
OUTPUT - Static variable in class org.encog.persist.PersistConst
Output.
OUTPUT_COUNT - Static variable in class org.encog.persist.PersistConst
The output count.
outputModeToString(PNNOutputMode) - Static method in class org.encog.neural.pnn.PersistBasicPNN
Convert output mode to string.
outputNeuronCount - Variable in class org.encog.neural.som.SOM
Number of output neurons.

P

p - Variable in class org.encog.mathutil.libsvm.svm_parameter
 
para(String) - Method in class org.encog.util.HTMLReport
 
param - Variable in class org.encog.mathutil.libsvm.svm_model
 
PARAM_C - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the const C.
PARAM_CACHE_SIZE - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the cache size.
PARAM_COEF0 - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the coef0.
PARAM_COMPETITIVE_MAX_WINNERS - Static variable in class org.encog.engine.network.activation.ActivationCompetitive
The offset to the parameter that holds the max winners.
PARAM_DEGREE - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the degree.
PARAM_EPS - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the eps.
PARAM_GAMMA - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the gamma.
PARAM_GAUSSIAN_CENTER - Static variable in class org.encog.engine.network.activation.ActivationGaussian
The offset to the parameter that holds the width.
PARAM_GAUSSIAN_PEAK - Static variable in class org.encog.engine.network.activation.ActivationGaussian
The offset to the parameter that holds the peak.
PARAM_GAUSSIAN_WIDTH - Static variable in class org.encog.engine.network.activation.ActivationGaussian
The offset to the parameter that holds the width.
PARAM_KERNEL_TYPE - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the kernel type.
PARAM_NU - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the nu.
PARAM_NUM_WEIGHT - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the number of weights.
PARAM_P - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the p.
PARAM_PROBABILITY - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the probability.
PARAM_RAMP_HIGH - Static variable in class org.encog.engine.network.activation.ActivationRamp
The ramp high parameter.
PARAM_RAMP_HIGH_THRESHOLD - Static variable in class org.encog.engine.network.activation.ActivationRamp
The ramp high threshold parameter.
PARAM_RAMP_LOW - Static variable in class org.encog.engine.network.activation.ActivationRamp
The ramp low parameter.
PARAM_RAMP_LOW_THRESHOLD - Static variable in class org.encog.engine.network.activation.ActivationRamp
The ramp low threshold parameter.
PARAM_SHRINKING - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the shrinking.
PARAM_START_ITERATIONS - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the statIterations.
PARAM_STEP_CENTER - Static variable in class org.encog.engine.network.activation.ActivationStep
The step center parameter.
PARAM_STEP_HIGH - Static variable in class org.encog.engine.network.activation.ActivationStep
The step high parameter.
PARAM_STEP_LOW - Static variable in class org.encog.engine.network.activation.ActivationStep
The step low parameter.
PARAM_SVM_TYPE - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the SVM type.
PARAM_WEIGHT - Static variable in class org.encog.ml.svm.PersistSVM
The paramater to hold the weight.
PARAM_WEIGHT_LABEL - Static variable in class org.encog.ml.svm.PersistSVM
The parameter to hold the weight label.
ParamsHolder - Class in org.encog.util
A class that can be used to parse parameters stored in a map.
ParamsHolder(Map<String, String>, CSVFormat) - Constructor for class org.encog.util.ParamsHolder
Construct the object.
ParamsHolder(Map<String, String>) - Constructor for class org.encog.util.ParamsHolder
Construct the object.
ParentSelection - Interface in org.encog.ml.genetic.selection
Will be expanded in the future.
parse(String) - Method in class org.encog.util.csv.CSVFormat
Parse the specified string to a double.
parse(String) - Static method in class org.encog.util.http.FormUtility
Parse a URL query string.
parseActivationFunction(Map<String, String>, String) - Static method in class org.encog.persist.EncogFileSection
Parse an activation function from a string.
parseAttributeName() - Method in class org.encog.parse.tags.read.ReadHTML
Parse the attribute name.
parseAttributeName() - Method in class org.encog.parse.tags.read.ReadTags
Parse an attribute name, if one is present.
parseBoolean(Map<String, String>, String) - Static method in class org.encog.persist.EncogFileSection
Parse a boolean from a name-value collection of params.
parseDate(String) - Static method in class org.encog.bot.rss.RSS
Simple utility function that converts a RSS formatted date into a Java date.
parseDate(String) - Static method in class org.encog.util.csv.ReadCSV
Parse a date.
parseDouble(Map<String, String>, String) - Static method in class org.encog.persist.EncogFileSection
Parse a double from a name-value collection of params.
parseDoubleArray(Map<String, String>, String) - Static method in class org.encog.persist.EncogFileSection
Parse a double array from a name-value collection of params.
ParseError - Exception in org.encog.parse
Indicates an error has occured in one of the parsers.
ParseError(String) - Constructor for exception org.encog.parse.ParseError
Construct a message exception.
ParseError(Throwable) - Constructor for exception org.encog.parse.ParseError
Construct an exception that holds another exception.
parseInt(Map<String, String>, String) - Static method in class org.encog.persist.EncogFileSection
Parse an int from a name-value collection of params.
parseIntArray(Map<String, String>, String) - Static method in class org.encog.persist.EncogFileSection
Parse an int array from a name-value collection of params.
parseLayer(String, int) - Static method in class org.encog.ml.factory.parse.ArchitectureParse
parse a layer.
parseLayers(String) - Static method in class org.encog.ml.factory.parse.ArchitectureParse
Parse all layers from a line of text.
parseMatrix(Map<String, String>, String) - Static method in class org.encog.persist.EncogFileSection
Parse a matrix from a name-value collection of params.
parseParams(String) - Static method in class org.encog.ml.factory.parse.ArchitectureParse
Parse parameters.
parseParams() - Method in class org.encog.persist.EncogFileSection
 
parseString() - Method in class org.encog.parse.tags.read.ReadTags
Called to parse a double or single quote string.
parseTag() - Method in class org.encog.parse.tags.read.ReadTags
Called when a tag is detected.
parseThroughComma() - Method in class org.encog.util.SimpleParser
 
parseTimeSlice(String) - Static method in class org.encog.app.analyst.util.CSVHeaders
Parse a timeslice from a header such as (t-1).
PatternError - Exception in org.encog.neural.pattern
This class is thrown when an error occurs while using one of the neural network pattern classes.
PatternError(String) - Constructor for exception org.encog.neural.pattern.PatternError
Construct a message exception.
PatternError(Throwable) - Constructor for exception org.encog.neural.pattern.PatternError
Construct an exception that holds another exception.
pause() - Method in class org.encog.ml.svm.training.SVMSearchTrain
Pause the training to continue later.
pause() - Method in class org.encog.ml.svm.training.SVMTrain
Pause the training to continue later.
pause() - Method in interface org.encog.ml.train.MLTrain
Pause the training to continue later.
pause() - Method in class org.encog.neural.cpn.training.TrainInstar
Pause the training to continue later.
pause() - Method in class org.encog.neural.cpn.training.TrainOutstar
Pause the training to continue later.
pause() - Method in class org.encog.neural.neat.training.NEATTraining
 
pause() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealing
 
pause() - Method in class org.encog.neural.networks.training.cross.CrossValidationKFold
Pause the training to continue later.
pause() - Method in class org.encog.neural.networks.training.genetic.NeuralGeneticAlgorithm
Pause the training to continue later.
pause() - Method in class org.encog.neural.networks.training.lma.LevenbergMarquardtTraining
 
pause() - Method in class org.encog.neural.networks.training.pnn.TrainBasicPNN
Pause the training to continue later.
pause() - Method in class org.encog.neural.networks.training.propagation.back.Backpropagation
Pause the training.
pause() - Method in class org.encog.neural.networks.training.propagation.manhattan.ManhattanPropagation
This training type does not support training continue.
pause() - Method in class org.encog.neural.networks.training.propagation.resilient.ResilientPropagation
Pause the training.
pause() - Method in class org.encog.neural.networks.training.propagation.scg.ScaledConjugateGradient
This training type does not support training continue.
pause() - Method in class org.encog.neural.networks.training.simple.TrainAdaline
Pause the training to continue later.
pause() - Method in class org.encog.neural.rbf.training.SVDTraining
Pause the training to continue later.
pause() - Method in class org.encog.neural.som.training.basic.BasicTrainSOM
Pause the training to continue later.
pause() - Method in class org.encog.neural.som.training.clustercopy.SOMClusterCopyTraining
Pause the training to continue later.
peek() - Method in class org.encog.parse.PeekableInputStream
Peek at the next character from the stream.
peek(int) - Method in class org.encog.parse.PeekableInputStream
Peek at a specified depth.
peek(String) - Method in class org.encog.parse.PeekableInputStream
Peek ahead and see if the specified string is present.
peek() - Method in class org.encog.util.SimpleParser
 
PeekableInputStream - Class in org.encog.parse
This is a special input stream that allows the program to peek one or more characters ahead in the file.
PeekableInputStream(InputStream) - Constructor for class org.encog.parse.PeekableInputStream
The constructor accepts an InputStream to setup the object.
perform(TrainingJob) - Method in interface org.encog.neural.networks.training.concurrent.performers.ConcurrentTrainingPerformer
Perform the specified job.
perform(TrainingJob) - Method in class org.encog.neural.networks.training.concurrent.performers.ConcurrentTrainingPerformerCPU
Perform the specified job.
PerformAnalysis - Class in org.encog.app.analyst.analyze
This class is used to perform an analysis of a CSV file.
PerformAnalysis(AnalystScript, String, boolean, AnalystFileFormat) - Constructor for class org.encog.app.analyst.analyze.PerformAnalysis
Construct the analysis object.
performBasicCounts() - Method in class org.encog.app.analyst.csv.basic.BasicFile
Perform a basic analyze of the file.
PerformerTask - Class in org.encog.neural.networks.training.concurrent.performers
A task to be performed.
PerformerTask(ConcurrentTrainingPerformer) - Constructor for class org.encog.neural.networks.training.concurrent.performers.PerformerTask
Construct the object.
performJobUnit(JobUnitContext) - Method in class org.encog.neural.prune.PruneIncremental
Perform an individual job unit, which is a single network to train and evaluate.
performJobUnit(JobUnitContext) - Method in class org.encog.util.concurrency.job.ConcurrentJob
Perform one job unit.
performMutation(Chromosome) - Method in interface org.encog.ml.genetic.mutate.Mutate
Perform a mutation on the specified chromosome.
performMutation(Chromosome) - Method in class org.encog.ml.genetic.mutate.MutatePerturb
Perform a perturb mutation on the specified chromosome.
performMutation(Chromosome) - Method in class org.encog.ml.genetic.mutate.MutateShuffle
Perform a shuffle mutation.
performRevert(Map<String, String>) - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Perform a revert.
PersistART1 - Class in org.encog.neural.art
Persist an ART1 network.
PersistART1() - Constructor for class org.encog.neural.art.PersistART1
 
PersistBAM - Class in org.encog.neural.bam
Persist the BAM network.
PersistBAM() - Constructor for class org.encog.neural.bam.PersistBAM
 
PersistBasicNetwork - Class in org.encog.neural.networks
Persist a basic network.
PersistBasicNetwork() - Constructor for class org.encog.neural.networks.PersistBasicNetwork
 
PersistBasicPNN - Class in org.encog.neural.pnn
Persist a PNN.
PersistBasicPNN() - Constructor for class org.encog.neural.pnn.PersistBasicPNN
 
PersistBoltzmann - Class in org.encog.neural.thermal
Persist the Boltzmann machine.
PersistBoltzmann() - Constructor for class org.encog.neural.thermal.PersistBoltzmann
 
PersistConst - Class in org.encog.persist
Some common persistance constants.
PersistCPN - Class in org.encog.neural.cpn
Persist a CPN network.
PersistCPN() - Constructor for class org.encog.neural.cpn.PersistCPN
 
PersistError - Exception in org.encog.persist
General error class for Encog persistence.
PersistError(String) - Constructor for exception org.encog.persist.PersistError
Construct a message exception.
PersistError(String, Throwable) - Constructor for exception org.encog.persist.PersistError
Construct an exception that holds another exception.
PersistError(Throwable) - Constructor for exception org.encog.persist.PersistError
Construct an exception that holds another exception.
PersistHopfield - Class in org.encog.neural.thermal
Persist the Hopfield network.
PersistHopfield() - Constructor for class org.encog.neural.thermal.PersistHopfield
 
PersistNEATNetwork - Class in org.encog.neural.neat
 
PersistNEATNetwork() - Constructor for class org.encog.neural.neat.PersistNEATNetwork
 
PersistNEATPopulation - Class in org.encog.neural.neat
 
PersistNEATPopulation() - Constructor for class org.encog.neural.neat.PersistNEATPopulation
 
PersistorRegistry - Class in org.encog.persist
Registry to hold persistors.
PersistRBFNetwork - Class in org.encog.neural.rbf
Persist a RBF network.
PersistRBFNetwork() - Constructor for class org.encog.neural.rbf.PersistRBFNetwork
 
PersistSOM - Class in org.encog.neural.som
Persist the SOM.
PersistSOM() - Constructor for class org.encog.neural.som.PersistSOM
 
PersistSVM - Class in org.encog.ml.svm
Persist a SVM.
PersistSVM() - Constructor for class org.encog.ml.svm.PersistSVM
 
PersistTrainingContinuation - Class in org.encog.neural.networks.training.propagation
Persist the training continuation.
PersistTrainingContinuation() - Constructor for class org.encog.neural.networks.training.propagation.PersistTrainingContinuation
 
plural(TimeUnit) - Method in class org.encog.util.time.EnglishTimeUnitNames
Get the plural form for a TimeUnit.
plural(TimeUnit) - Method in interface org.encog.util.time.TimeUnitNames
Get the plural name for the specified time unit.
PNNFactory - Class in org.encog.ml.factory.method
A factory to create PNN networks.
PNNFactory() - Constructor for class org.encog.ml.factory.method.PNNFactory
 
PNNKernelType - Enum in org.encog.neural.pnn
Specifies the kernel type for the PNN.
PNNOutputMode - Enum in org.encog.neural.pnn
The output mode that will be used by the PNN.
PNNPattern - Class in org.encog.neural.pattern
Pattern to create a PNN.
PNNPattern() - Constructor for class org.encog.neural.pattern.PNNPattern
 
PNNTrainFactory - Class in org.encog.ml.factory.train
A factory used to create PNN trainers.
PNNTrainFactory() - Constructor for class org.encog.ml.factory.train.PNNTrainFactory
 
POLY - Static variable in class org.encog.mathutil.libsvm.svm_parameter
 
PoolItem - Class in org.encog.util.concurrency
An Encog task being executed by the Java thread pool.
PoolItem(EngineTask, TaskGroup) - Constructor for class org.encog.util.concurrency.PoolItem
Create a pool item.
pop() - Method in class org.encog.app.quant.util.BarBuffer
Pop (and remove) the oldest bar in the buffer.
Population - Interface in org.encog.ml.genetic.population
Defines a population of genomes.
POSITIVE_ETA - Static variable in class org.encog.neural.flat.train.prop.RPROPConst
The POSITIVE ETA value.
postIteration() - Method in class org.encog.ml.train.BasicTraining
Call the strategies after an iteration.
postIteration() - Method in class org.encog.ml.train.strategy.end.EndIterationsStrategy
Called just after a training iteration.
postIteration() - Method in class org.encog.ml.train.strategy.end.EndMaxErrorStrategy
Called just after a training iteration.
postIteration() - Method in class org.encog.ml.train.strategy.end.EndMinutesStrategy
Called just after a training iteration.
postIteration() - Method in class org.encog.ml.train.strategy.Greedy
Called just after a training iteration.
postIteration() - Method in class org.encog.ml.train.strategy.HybridStrategy
Called just after a training iteration.
postIteration() - Method in class org.encog.ml.train.strategy.RequiredImprovementStrategy
Called just after a training iteration.
postIteration() - Method in class org.encog.ml.train.strategy.ResetStrategy
Called just after a training iteration.
postIteration() - Method in class org.encog.ml.train.strategy.StopTrainingStrategy
Called just after a training iteration.
postIteration() - Method in interface org.encog.ml.train.strategy.Strategy
Called just after a training iteration.
postIteration() - Method in class org.encog.neural.networks.training.strategy.SmartLearningRate
Called just after a training iteration.
postIteration() - Method in class org.encog.neural.networks.training.strategy.SmartMomentum
Called just after a training iteration.
pow(double, double) - Static method in class org.encog.mathutil.BoundMath
Calculate the power of a number.
PRECOMPUTED - Static variable in class org.encog.mathutil.libsvm.svm_parameter
 
preIteration() - Method in class org.encog.ml.train.BasicTraining
Call the strategies before an iteration.
preIteration() - Method in class org.encog.ml.train.strategy.end.EndIterationsStrategy
Called just before a training iteration.
preIteration() - Method in class org.encog.ml.train.strategy.end.EndMaxErrorStrategy
Called just before a training iteration.
preIteration() - Method in class org.encog.ml.train.strategy.end.EndMinutesStrategy
Called just before a training iteration.
preIteration() - Method in class org.encog.ml.train.strategy.Greedy
Called just before a training iteration.
preIteration() - Method in class org.encog.ml.train.strategy.HybridStrategy
Called just before a training iteration.
preIteration() - Method in class org.encog.ml.train.strategy.RequiredImprovementStrategy
Called just before a training iteration.
preIteration() - Method in class org.encog.ml.train.strategy.ResetStrategy
Called just before a training iteration.
preIteration() - Method in class org.encog.ml.train.strategy.StopTrainingStrategy
Called just before a training iteration.
preIteration() - Method in interface org.encog.ml.train.strategy.Strategy
Called just before a training iteration.
preIteration() - Method in class org.encog.neural.networks.training.strategy.SmartLearningRate
Called just before a training iteration.
preIteration() - Method in class org.encog.neural.networks.training.strategy.SmartMomentum
Called just before a training iteration.
prepareOutputFile(File) - Method in class org.encog.app.analyst.csv.basic.BasicFile
Prepare the output file, write headers if needed.
prepareRead() - Method in class org.encog.ml.data.buffer.codec.ArrayDataCODEC
Prepare to read from an external data source.
prepareRead() - Method in class org.encog.ml.data.buffer.codec.CSVDataCODEC
Prepare to read from the CSV file.
prepareRead() - Method in interface org.encog.ml.data.buffer.codec.DataSetCODEC
Prepare to read from an external data source.
prepareRead() - Method in class org.encog.ml.data.buffer.codec.ExcelCODEC
Prepare to read from an external data source.
prepareRead() - Method in class org.encog.ml.data.buffer.codec.NeuralDataSetCODEC
Prepare to read from an external data source.
prepareRead() - Method in class org.encog.ml.data.buffer.codec.SQLCODEC
Prepare to read from an external data source.
prepareRevert() - Method in class org.encog.app.analyst.script.prop.ScriptProperties
Prepare a revert.
prepareWrite(int, int, int) - Method in class org.encog.ml.data.buffer.codec.ArrayDataCODEC
Prepare to write to an external data destination.
prepareWrite(int, int, int) - Method in class org.encog.ml.data.buffer.codec.CSVDataCODEC
Prepare to write to a CSV file.
prepareWrite(int, int, int) - Method in interface org.encog.ml.data.buffer.codec.DataSetCODEC
Prepare to write to an external data destination.
prepareWrite(int, int, int) - Method in class org.encog.ml.data.buffer.codec.ExcelCODEC
Prepare to write to an external data destination.
prepareWrite(int, int, int) - Method in class org.encog.ml.data.buffer.codec.NeuralDataSetCODEC
Prepare to write to an external data destination.
prepareWrite(int, int, int) - Method in class org.encog.ml.data.buffer.codec.SQLCODEC
Prepare to write to an external data destination.
print(String) - Method in interface org.encog.mathutil.libsvm.svm_print_interface
 
probA - Variable in class org.encog.mathutil.libsvm.svm_model
 
probability - Variable in class org.encog.mathutil.libsvm.svm_parameter
 
probB - Variable in class org.encog.mathutil.libsvm.svm_model
 
process(EncogAnalyst) - Method in class org.encog.app.analyst.analyze.PerformAnalysis
Perform the analysis.
process(File, int, EncogAnalyst, int) - Method in class org.encog.app.analyst.csv.AnalystClusterCSV
Process the file and cluster.
process(File, MLMethod) - Method in class org.encog.app.analyst.csv.AnalystEvaluateCSV
Process the file.
process(File, MLRegression) - Method in class org.encog.app.analyst.csv.AnalystEvaluateRawCSV
Process the file.
process(File, int, int) - Method in class org.encog.app.analyst.csv.balance.BalanceCSV
Process and balance the data.
process(File) - Method in class org.encog.app.analyst.csv.filter.FilterCSV
Process the input file.
process() - Method in class org.encog.app.analyst.csv.segregate.SegregateCSV
Process the input file and segregate into the output files.
process(File) - Method in class org.encog.app.analyst.csv.shuffle.ShuffleCSV
Process, and generate the output file.
process(File, File, boolean, CSVFormat) - Method in class org.encog.app.analyst.csv.sort.SortCSV
Process, and sort the files.
process(double[]) - Method in class org.encog.app.analyst.csv.TimeSeriesUtil
Process a row.
process(File) - Method in class org.encog.app.quant.indicators.ProcessIndicators
Process and write the specified output file.
process(File) - Method in class org.encog.app.quant.ninja.NinjaFileConvert
Process the file and output to the target file.
process() - Method in class org.encog.neural.prune.PruneIncremental
Begin the prune process.
process(double[]) - Method in class org.encog.util.arrayutil.NormalizeArray
Normalize the array.
process(double[]) - Method in class org.encog.util.arrayutil.TemporalWindowArray
Process the array.
process() - Method in class org.encog.util.benchmark.EncogBenchmark
Perform the benchmark.
process() - Method in class org.encog.util.concurrency.job.ConcurrentJob
Process the job.
processImage(Image) - Method in interface org.encog.util.downsample.Downsample
Process the specified image.
processImage(Image) - Method in class org.encog.util.downsample.RGBDownsample
Process the image and prepare it to be downsampled.
ProcessIndicators - Class in org.encog.app.quant.indicators
Process indicators and generate output.
ProcessIndicators() - Constructor for class org.encog.app.quant.indicators.ProcessIndicators
 
processTask(EngineTask) - Method in class org.encog.util.concurrency.EngineConcurrency
Process the specified task.
processTask(EngineTask, TaskGroup) - Method in class org.encog.util.concurrency.EngineConcurrency
Process the specified task.
produceReport() - Method in class org.encog.app.analyst.report.AnalystReport
Produce the report.
produceReport(File) - Method in class org.encog.app.analyst.report.AnalystReport
Produce a report for a filename.
Propagation - Class in org.encog.neural.networks.training.propagation
Implements basic functionality that is needed by each of the propagation methods.
Propagation(ContainsFlat, MLDataSet) - Constructor for class org.encog.neural.networks.training.propagation.Propagation
Construct a propagation object.
PROPERTIES - Static variable in class org.encog.persist.PersistConst
Properties.
PROPERTY_A1 - Static variable in class org.encog.neural.art.ART
Neural network property, the A1 parameter.
PROPERTY_ACT_RESPONSE - Static variable in class org.encog.neural.neat.training.NEATNeuronGene
 
PROPERTY_B1 - Static variable in class org.encog.neural.art.ART
Neural network property, the B1 parameter.
PROPERTY_BAYESIAN_REGULARIZATION - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for bayes reg.
PROPERTY_C - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for constant.
PROPERTY_C1 - Static variable in class org.encog.ml.factory.train.SVMSearchFactory
Property for constant.
PROPERTY_C1 - Static variable in class org.encog.neural.art.ART
Neural network property, the C1 parameter.
PROPERTY_C2 - Static variable in class org.encog.ml.factory.train.SVMSearchFactory
Property for constant.
PROPERTY_C_STEP - Static variable in class org.encog.ml.factory.train.SVMSearchFactory
Property for constant.
PROPERTY_D1 - Static variable in class org.encog.neural.art.ART
Neural network property, the D1 parameter.
PROPERTY_DIMENSIONS - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for dimensions.
PROPERTY_END_LEARNING_RATE - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for ending learning rate.
PROPERTY_END_RADIUS - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for ending radius.
PROPERTY_F1_COUNT - Static variable in class org.encog.persist.PersistConst
The F1 count.
PROPERTY_F2_COUNT - Static variable in class org.encog.persist.PersistConst
The F2 count.
PROPERTY_GAMMA - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for gamma.
PROPERTY_GAMMA1 - Static variable in class org.encog.ml.factory.train.SVMSearchFactory
Property for gamma.
PROPERTY_GAMMA2 - Static variable in class org.encog.ml.factory.train.SVMSearchFactory
Property for gamma.
PROPERTY_GAMMA_STEP - Static variable in class org.encog.ml.factory.train.SVMSearchFactory
Property for gamma.
PROPERTY_GENOMES - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the genomes collection.
PROPERTY_ID - Static variable in class org.encog.persist.PersistConst
Property id.
PROPERTY_INITIAL_UPDATE - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for init update.
PROPERTY_INNOVATIONS - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the innovations collection.
PROPERTY_ITERATIONS - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for iterations.
PROPERTY_L - Static variable in class org.encog.neural.art.ART
Neural network property, the L parameter.
PROPERTY_LEARNING_MOMENTUM - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for momentum.
PROPERTY_LEARNING_RATE - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for learning rate.
PROPERTY_LINKS - Static variable in class org.encog.neural.neat.NEATNetwork
 
PROPERTY_LINKS - Static variable in class org.encog.neural.neat.training.NEATGenome
 
PROPERTY_MATE - Static variable in class org.encog.ml.factory.MLTrainFactory
Percent to mate.
PROPERTY_MAX_STEP - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for max step.
PROPERTY_MUTATION - Static variable in class org.encog.ml.factory.MLTrainFactory
Percent to mutate.
PROPERTY_NEAT_ACTIVATION - Static variable in class org.encog.neural.neat.NEATPopulation
 
PROPERTY_NEIGHBORHOOD - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for neighborhood.
PROPERTY_NETWORK_DEPTH - Static variable in class org.encog.neural.neat.NEATNetwork
 
PROPERTY_NEURONS - Static variable in class org.encog.neural.neat.training.NEATGenome
 
PROPERTY_NEXT_GENE_ID - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the next gene id.
PROPERTY_NEXT_GENOME_ID - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the next genome id.
PROPERTY_NEXT_INNOVATION_ID - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the next innovation id.
PROPERTY_NEXT_SPECIES_ID - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the next species id.
PROPERTY_NO_WINNER - Static variable in class org.encog.neural.art.ART
Neural network property for no winner.
PROPERTY_OLD_AGE_PENALTY - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the old age penalty.
PROPERTY_OLD_AGE_THRESHOLD - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the old age threshold.
PROPERTY_OUTPUT_ACTIVATION - Static variable in class org.encog.neural.neat.NEATPopulation
 
PROPERTY_outputMode - Static variable in class org.encog.neural.pnn.PersistBasicPNN
The output mode property.
PROPERTY_POPULATION_SIZE - Static variable in class org.encog.ml.factory.MLTrainFactory
Population size.
PROPERTY_POPULATION_SIZE - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the population size.
PROPERTY_PROPERTY_NEIGHBORHOOD - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for neighborhood.
PROPERTY_RBF_TYPE - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for rbf type.
PROPERTY_RECURRENT - Static variable in class org.encog.neural.neat.training.NEATNeuronGene
 
PROPERTY_SNAPSHOT - Static variable in class org.encog.neural.neat.NEATNetwork
 
PROPERTY_SPECIES - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the species collection.
PROPERTY_SPLIT_X - Static variable in class org.encog.neural.neat.training.NEATNeuronGene
 
PROPERTY_SPLIT_Y - Static variable in class org.encog.neural.neat.training.NEATNeuronGene
 
PROPERTY_START_LEARNING_RATE - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for starting learning rate.
PROPERTY_START_RADIUS - Static variable in class org.encog.ml.factory.MLTrainFactory
Property for starting radius.
PROPERTY_SURVIVAL_RATE - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the survival rate.
PROPERTY_TEMPERATURE_START - Static variable in class org.encog.ml.factory.MLTrainFactory
The starting temperature.
PROPERTY_TEMPERATURE_STOP - Static variable in class org.encog.ml.factory.MLTrainFactory
The ending temperature.
PROPERTY_VIGILANCE - Static variable in class org.encog.neural.art.ART
Neural network property, the vigilance parameter.
PROPERTY_WEIGHTS_F1_F2 - Static variable in class org.encog.persist.PersistConst
The weights from F1 to F2.
PROPERTY_WEIGHTS_F2_F1 - Static variable in class org.encog.persist.PersistConst
The weights from F2 to F1.
PROPERTY_YOUNG_AGE_BONUS - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the young age bonus.
PROPERTY_YOUNG_AGE_THRESHOLD - Static variable in interface org.encog.ml.genetic.population.Population
Property tag for the young age threshold.
PropertyConstraints - Class in org.encog.app.analyst.script.prop
Holds constant type information for each of the properties that the script might have.
PropertyEntry - Class in org.encog.app.analyst.script.prop
A property entry for the Encog Analyst.
PropertyEntry(PropertyType, String, String) - Constructor for class org.encog.app.analyst.script.prop.PropertyEntry
Construct a property entry.
PropertyType - Enum in org.encog.app.analyst.script.prop
The property types supported for Encog Analyst.
prune(int, int) - Method in class org.encog.neural.prune.PruneSelective
Prune one of the neurons from this layer.
PruneIncremental - Class in org.encog.neural.prune
This class is used to help determine the optimal configuration for the hidden layers of a neural network.
PruneIncremental(MLDataSet, NeuralNetworkPattern, int, int, int, StatusReportable) - Constructor for class org.encog.neural.prune.PruneIncremental
Construct an object to determine the optimal number of hidden layers and neurons for the specified training data and pattern.
PruneSelective - Class in org.encog.neural.prune
Prune a neural network selectively.
PruneSelective(BasicNetwork) - Constructor for class org.encog.neural.prune.PruneSelective
Construct an object prune the neural network.
purge() - Method in class org.encog.ml.genetic.species.BasicSpecies
Purge all members, increase age by one and count the number of generations with no improvement.
purge() - Method in interface org.encog.ml.genetic.species.Species
Purge old unsuccessful genomes.
put(String, double[]) - Method in class org.encog.neural.networks.training.propagation.TrainingContinuation
Save a list of doubles.
putArray(UNIT_TYPE[]) - Method in class org.encog.ml.anneal.SimulatedAnnealing
Store the array.
putArray(double[]) - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealing
Convert an array of doubles to the current best network.
putArray(Double[]) - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealingHelper
Used to pass the putArray call on to the parent object.
pythag(double, double) - Static method in class org.encog.neural.rbf.training.SVD
 

Q

QRDecomposition - Class in org.encog.mathutil.matrices.decomposition
QR Decomposition.
QRDecomposition(Matrix) - Constructor for class org.encog.mathutil.matrices.decomposition.QRDecomposition
QR Decomposition, computed by Householder reflections.
QuantError - Exception in org.encog.app.quant
Used to represent any error that occurs in the quant part of Encog.
QuantError(String) - Constructor for exception org.encog.app.quant.QuantError
Construct a message exception.
QuantError(Throwable) - Constructor for exception org.encog.app.quant.QuantError
Construct an exception that holds another exception.
QuantTask - Interface in org.encog.app.quant
Defines an interface for Encog quant tasks.
QUOTE - Static variable in class org.encog.persist.EncogWriteHelper
A quote char.

R

rad2deg(double) - Static method in class org.encog.mathutil.EncogMath
Convert radians to degrees.
RadialBasisFunction - Interface in org.encog.mathutil.rbf
A multi-dimension RBF.
RadialBasisPattern - Class in org.encog.neural.pattern
A radial basis function (RBF) network uses several radial basis functions to provide a more dynamic hidden layer activation function than many other types of neural network.
RadialBasisPattern() - Constructor for class org.encog.neural.pattern.RadialBasisPattern
 
RANDOM_LENGTH - Static variable in class org.encog.util.http.FormUtility
The length of random string to create for multipart.
randomInt(int, int) - Static method in class org.encog.mathutil.randomize.RangeRandomizer
 
randomize(double, double) - Method in class org.encog.mathutil.matrices.Matrix
Randomize the matrix.
randomize(BasicNetwork, int) - Method in class org.encog.mathutil.randomize.BasicRandomizer
Randomize one level of a neural network.
randomize(double[]) - Method in class org.encog.mathutil.randomize.BasicRandomizer
Randomize the array based on an array, modify the array.
randomize(double[], int, int) - Method in class org.encog.mathutil.randomize.BasicRandomizer
Randomize the array based on an array, modify the array.
randomize(double[][]) - Method in class org.encog.mathutil.randomize.BasicRandomizer
Randomize the 2d array based on an array, modify the array.
randomize(Matrix) - Method in class org.encog.mathutil.randomize.BasicRandomizer
Randomize the matrix based on an array, modify the array.
randomize(MLMethod) - Method in class org.encog.mathutil.randomize.BasicRandomizer
Randomize the synapses and biases in the basic network based on an array, modify the array.
randomize(double) - Method in class org.encog.mathutil.randomize.ConsistentRandomizer
Generate a random number based on the range specified in the constructor.
randomize(BasicNetwork) - Method in class org.encog.mathutil.randomize.ConsistentRandomizer
Randomize the network.
randomize(double) - Method in class org.encog.mathutil.randomize.ConstRandomizer
Generate a random number based on the range specified in the constructor.
randomize(double) - Method in class org.encog.mathutil.randomize.Distort
Distort the random number by the factor that was specified in the constructor.
randomize(double) - Method in class org.encog.mathutil.randomize.FanInRandomizer
Starting with the specified number, randomize it to the degree specified by this randomizer.
randomize(double[]) - Method in class org.encog.mathutil.randomize.FanInRandomizer
Randomize the array based on an array, modify the array.
randomize(double[][]) - Method in class org.encog.mathutil.randomize.FanInRandomizer
Randomize the 2d array based on an array, modify the array.
randomize(Matrix) - Method in class org.encog.mathutil.randomize.FanInRandomizer
Randomize the matrix based on an array, modify the array.
randomize(BasicNetwork, int) - Method in class org.encog.mathutil.randomize.FanInRandomizer
Randomize one level of a neural network.
randomize(double) - Method in class org.encog.mathutil.randomize.GaussianRandomizer
Generate a random number.
randomize(MLMethod) - Method in class org.encog.mathutil.randomize.NguyenWidrowRandomizer
The Nguyen-Widrow initialization algorithm is the following :
1.
randomize(BasicNetwork, int) - Method in class org.encog.mathutil.randomize.NguyenWidrowRandomizer
Randomize one level of a neural network.
randomize(MLMethod) - Method in interface org.encog.mathutil.randomize.Randomizer
Randomize the synapses and bias values in the basic network based on an array, modify the array.
randomize(double) - Method in interface org.encog.mathutil.randomize.Randomizer
Starting with the specified number, randomize it to the degree specified by this randomizer.
randomize(double[]) - Method in interface org.encog.mathutil.randomize.Randomizer
Randomize the array based on an array, modify the array.
randomize(double[][]) - Method in interface org.encog.mathutil.randomize.Randomizer
Randomize the 2d array based on an array, modify the array.
randomize(Matrix) - Method in interface org.encog.mathutil.randomize.Randomizer
Randomize the matrix based on an array, modify the array.
randomize(double[], int, int) - Method in interface org.encog.mathutil.randomize.Randomizer
Randomize an array.
randomize(double, double) - Static method in class org.encog.mathutil.randomize.RangeRandomizer
Generate a random number in the specified range.
randomize(double) - Method in class org.encog.mathutil.randomize.RangeRandomizer
Generate a random number based on the range specified in the constructor.
randomize() - Method in class org.encog.ml.anneal.SimulatedAnnealing
Randomize the weight matrix.
randomize() - Method in class org.encog.neural.flat.FlatNetwork
Perform a simple randomization of the weights of the neural network between -1 and 1.
randomize(double, double) - Method in class org.encog.neural.flat.FlatNetwork
Perform a simple randomization of the weights of the neural network between the specified hi and lo.
randomize() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealing
Randomize the weights and bias values.
randomize() - Method in class org.encog.neural.networks.training.anneal.NeuralSimulatedAnnealingHelper
Call the owner's randomize method.
RANDOMIZE_CONFIG_SOURCE_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "RANDOMIZE:CONFIG_sourceFile".
RANDOMIZE_CONFIG_TARGET_FILE - Static variable in class org.encog.app.analyst.script.prop.ScriptProperties
Property for: "RANDOMIZE:CONFIG_targetFile".
randomizeNeuron(double, double, int, int) - Method in class org.encog.neural.prune.PruneSelective
 
randomizeNeuron(int, int) - Method in class org.encog.neural.prune.PruneSelective
Assign random values to the network.
Randomizer - Interface in org.encog.mathutil.randomize
Defines the interface for a class that is capable of randomizing the weights and bias values of a neural network.
randomizeRBFCentersAndWidths(double, double, RBFEnum) - Method in class org.encog.neural.rbf.RBFNetwork
Set the RBF components to random values.
randomString() - Static method in class org.encog.util.http.FormUtility
Generate a random string, of a specified length.
RandomTrainingFactory - Class in org.encog.util.benchmark
Class used to generate random training sets.
range(double, double) - Method in class org.encog.mathutil.LinearCongruentialGenerator
Generate a random number in the specified range.
RangeRandomizer - Class in org.encog.mathutil.randomize
A randomizer that will create random weight and bias values that are between a specified range.
RangeRandomizer(double, double) - Constructor for class org.encog.mathutil.randomize.RangeRandomizer
Construct a range randomizer.
rank() - Method in class org.encog.mathutil.matrices.decomposition.SingularValueDecomposition
Effective numerical matrix rank
RBF - Static variable in class org.encog.mathutil.libsvm.svm_parameter
 
RBFEnum - Enum in org.encog.mathutil.rbf
The implemented function types of the RBFs.
RBFNetwork - Class in org.encog.neural.rbf
RBF neural network.
RBFNetwork() - Constructor for class org.encog.neural.rbf.RBFNetwork
Construct RBF network.
RBFNetwork(int, int, int, RBFEnum) - Constructor for class org.encog.neural.rbf.RBFNetwork
Construct RBF network.
RBFNetwork(int, int, RadialBasisFunction[]) - Constructor for class org.encog.neural.rbf.RBFNetwork
Construct RBF network.
RBFNetworkFactory - Class in org.encog.ml.factory.method
A factory to create RBF networks.
RBFNetworkFactory() - Constructor for class org.encog.ml.factory.method.RBFNetworkFactory
 
RBFSVDFactory - Class in org.encog.ml.factory.train
This factory is used to create a SVD trainer for an RBF network.
RBFSVDFactory() - Constructor for class org.encog.ml.factory.train.RBFSVDFactory
 
read(double[], double[]) - Method in class org.encog.ml.data.buffer.codec.ArrayDataCODEC
Read one record of data from an external source.
read(double[], double[]) - Method in class org.encog.ml.data.buffer.codec.CSVDataCODEC
Read one record of data from a CSV file.
read(double[], double[]) - Method in interface org.encog.ml.data.buffer.codec.DataSetCODEC
Read one record of data from an external source.
read(double[], double[]) - Method in class org.encog.ml.data.buffer.codec.ExcelCODEC
Read one record of data from an external source.
read(double[], double[]) - Method in class org.encog.ml.data.buffer.codec.NeuralDataSetCODEC
Read one record of data from an external source.
read(double[], double[]) - Method in class org.encog.ml.data.buffer.codec.SQLCODEC
Read one record of data from an external source.
read() - Method in class org.encog.ml.data.buffer.EncogEGBFile
Read a single double.
read(double[]) - Method in class org.encog.ml.data.buffer.EncogEGBFile
Read an array of doubles.
read(int, double[]) - Method in class org.encog.ml.data.buffer.EncogEGBFile
Read a double array at the specified record.
read(int, int) - Method in class org.encog.ml.data.buffer.EncogEGBFile
Read a row and column.
read(InputStream) - Method in class org.encog.ml.svm.PersistSVM
Read the object from an input stream.
read(InputStream) - Method in class org.encog.neural.art.PersistART1
Read the object from an input stream.
read(InputStream) - Method in class org.encog.neural.bam.PersistBAM
Read the object from an input stream.
read(InputStream) - Method in class org.encog.neural.cpn.PersistCPN
Read the object from an input stream.
read(InputStream) - Method in class org.encog.neural.neat.PersistNEATNetwork
 
read(InputStream) - Method in class org.encog.neural.neat.PersistNEATPopulation
 
read(InputStream) - Method in class org.encog.neural.networks.PersistBasicNetwork
Read the object from an input stream.
read(InputStream) - Method in class org.encog.neural.networks.training.propagation.PersistTrainingContinuation
Read the object from an input stream.
read(InputStream) - Method in class org.encog.neural.pnn.PersistBasicPNN
Read the object from an input stream.
read(InputStream) - Method in class org.encog.neural.rbf.PersistRBFNetwork
Read the object from an input stream.
read(InputStream) - Method in class org.encog.neural.som.PersistSOM
Read the object from an input stream.
read(InputStream) - Method in class org.encog.neural.thermal.PersistBoltzmann
Read the object from an input stream.
read(InputStream) - Method in class org.encog.neural.thermal.PersistHopfield
Read the object from an input stream.
read() - Method in class org.encog.parse.PeekableInputStream
Read a single byte from the stream.
read() - Method in class org.encog.parse.tags.read.ReadTags
Read a single character from the HTML source, if this function returns zero(0) then you should call getTag to see what tag was found.
read(InputStream) - Method in interface org.encog.persist.EncogPersistor
Read the object from an input stream.
readChar() - Method in class org.encog.util.SimpleParser
 
ReadCSV - Class in org.encog.util.csv
Read and parse CSV format files.
ReadCSV(InputStream, boolean, char) - Constructor for class org.encog.util.csv.ReadCSV
Construct a CSV reader from an input stream.
ReadCSV(InputStream, boolean, CSVFormat) - Constructor for class org.encog.util.csv.ReadCSV
Construct a CSV reader from an input stream.
ReadCSV(String, boolean, char) - Constructor for class org.encog.util.csv.ReadCSV
Construct a CSV reader from a filename.
ReadCSV(String, boolean, CSVFormat) - Constructor for class org.encog.util.csv.ReadCSV
Construct a CSV reader from a filename.
readFileAsString(File) - Static method in class org.encog.util.file.FileUtil
 
readHeaders(ReadCSV) - Method in class org.encog.app.analyst.csv.basic.BasicFile
Read the headers from a CSV file.
ReadHTML - Class in org.encog.parse.tags.read
This class is designed to parse HTML documents.
ReadHTML(InputStream) - Constructor for class org.encog.parse.tags.read.ReadHTML
Construct a HTML reader.
readIntToTag() - Method in class org.encog.parse.tags.read.ReadXML
Read an integer that is contained between the current position, and the next tag.
readNextSection() - Method in class org.encog.persist.EncogReadHelper
Read the next section.
readPropertyBlock() - Method in class org.encog.parse.tags.read.ReadXML
Read all property data until an end tag, which corrisponds to the current tag, is found.
readQuotedString() - Method in class org.encog.util.SimpleParser
 
readStream(InputStream) - Static method in class org.encog.util.file.Directory
Read the entire contents of a stream into a string.
ReadTags - Class in org.encog.parse.tags.read
Base class used to read tags.
ReadTags(InputStream) - Constructor for class org.encog.parse.tags.read.ReadTags
The constructor should be passed an InputStream that we will parse from.
readTextFile(String) - Static method in class org.encog.util.file.Directory
Read the entire contents of a stream into a string.
readTextToTag() - Method in class org.encog.parse.tags.read.ReadXML
Read all text between the current position and the next tag.
readToTag() - Method in class org.encog.parse.tags.read.ReadTags
Read until we reach the next tag.
readToWhiteSpace() - Method in class org.encog.util.SimpleParser
 
ReadXML - Class in org.encog.parse.tags.read
This class is designed to read XML.
ReadXML(InputStream) - Constructor for class org.encog.parse.tags.read.ReadXML
Construct an XML reader.
ready() - Method in interface org.encog.neural.networks.training.concurrent.performers.ConcurrentTrainingPerformer
 
ready() - Method in class org.encog.neural.networks.training.concurrent.performers.ConcurrentTrainingPerformerCPU
reanalyze() - Method in class org.encog.app.analyst.wizard.AnalystWizard
Reanalyze column ranges.
RECURRENT - Static variable in class org.encog.persist.PersistConst
Recurrent.
ReflectionUtil - Class in org.encog.util.obj
This class includes some utilities to be used with reflection.
registerError(Throwable) - Method in class org.encog.util.concurrency.EngineConcurrency
Allows threads to register errors, these errors will be thrown by the main thread.
registerPlugin(EncogPluginBase) - Method in class org.encog.Encog
 
registerPluginDir(File) - Method in class org.encog.Encog
 
remaining() - Method in class org.encog.util.SimpleParser
 
remove() - Method in class org.encog.ml.data.basic.BasicMLDataSet.BasicMLIterator
remove() - Method in class org.encog.ml.data.buffer.BufferedDataSetIterator
Not supported.
remove() - Method in class org.encog.ml.data.folded.FoldedIterator
remove(MLData) - Method in class org.encog.ml.kmeans.KMeansCluster
Remove the specified item.
remove(MLData) - Method in interface org.encog.ml.MLCluster
Remove the specified item.
removeAdditional(BufferedNeuralDataSet) - Method in class org.encog.ml.data.buffer.BufferedNeuralDataSet
Remove an additional dataset that was created.
removeAnalystListener(AnalystListener) - Method in class org.encog.app.analyst.EncogAnalyst
Remove a listener.
renameColumn(int, String) - Method in class org.encog.app.quant.indicators.ProcessIndicators
Rename a column.
report(int, int, String) - Method in interface org.encog.app.analyst.AnalystListener
Report progress on a task.
report(int, int, String) - Method in class org.encog.app.analyst.ConsoleAnalystListener
Report progress on a task.
report(int, int, String) - Method in class org.encog.app.analyst.util.AnalystReportBridge
Report on current status.
report(int, int, String) - Method in class org.encog.ConsoleStatusReportable
Simply display any status reports.
report(double[], double, Throwable) - Method in class org.encog.neural.flat.train.prop.TrainFlatNetworkProp
Called by the worker threads to report the progress at each step.
report(int, int, String) - Method in class org.encog.NullStatusReportable
Simply ignore any status reports.
report(int, int, String) - Method in interface org.encog.StatusReportable
Report on current status.
REPORT_INTERVAL - Static variable in class org.encog.app.analyst.csv.basic.BasicFile
The default report interval.
reportCommandBegin(int, int, String) - Method in interface org.encog.app.analyst.AnalystListener
Report that a command has begun.
reportCommandBegin(int, int, String) - Method in class org.encog.app.analyst.ConsoleAnalystListener
Report that a command has begun.
reportCommandEnd(boolean) - Method in interface org.encog.app.analyst.AnalystListener
Report that a command has ended.
reportCommandEnd(boolean) - Method in class org.encog.app.analyst.ConsoleAnalystListener
Report that a command has ended.
reportDone(boolean) - Method in class org.encog.app.analyst.csv.basic.BasicFile
Report that we are done.
reportDone(String) - Method in class org.encog.app.analyst.csv.basic.BasicFile
Report that we are done.
reportStatus(JobUnitContext, String) - Method in class org.encog.util.concurrency.job.ConcurrentJob
Report the status for this job.
reportTraining(MLTrain) - Method in interface org.encog.app.analyst.AnalystListener
Report progress on training.
reportTraining(MLTrain) - Method in class org.encog.app.analyst.ConsoleAnalystListener
Report progress on training.
reportTraining(MLTrain) - Method in class org.encog.app.analyst.EncogAnalyst
Report training.
reportTrainingBegin() - Method in interface org.encog.app.analyst.AnalystListener
Report that training has begun.
reportTrainingBegin() - Method in class org.encog.app.analyst.ConsoleAnalystListener
Report that training has begun.
reportTrainingBegin() - Method in class org.encog.app.analyst.EncogAnalyst
Report that training has begun.
reportTrainingEnd() - Method in interface org.encog.app.analyst.AnalystListener
Report that training has ended.
reportTrainingEnd() - Method in class org.encog.app.analyst.ConsoleAnalystListener
Report that training has ended.
reportTrainingEnd() - Method in class org.encog.app.analyst.EncogAnalyst
Report that training has ended.
requestCancelCommand() - Method in interface org.encog.app.analyst.AnalystListener
Request to cancel current command.
requestCancelCommand() - Method in class org.encog.app.analyst.ConsoleAnalystListener
Request to cancel current command.
requestNextTask() - Method in class org.encog.neural.prune.PruneIncremental
Request the next task.
requestNextTask() - Method in class org.encog.util.concurrency.job.ConcurrentJob
Request the next task to be processed.
requestShutdown() - Method in interface org.encog.app.analyst.AnalystListener
Request stop the entire process.
requestShutdown() - Method in class org.encog.app.analyst.ConsoleAnalystListener
Request stop the entire process.
requestStop() - Method in class org.encog.app.analyst.csv.basic.